Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2978

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
3,578,256	+				+1.1
3,578,256	+				+1.1
3,578,316	-				-0.7
3,578,501	-		Shewana3_2977	0.51	-0.6
3,578,577	+		Shewana3_2977	0.69	-0.2
3,578,608	-		Shewana3_2977	0.76	+0.1
3,578,620	+		Shewana3_2977	0.79	-1.5
3,578,621	-		Shewana3_2977	0.79	-1.3
3,578,621	-		Shewana3_2977	0.79	+0.3
3,578,687	-				+0.1
3,578,699	+				+5.8
3,578,831	+				+0.7
3,578,831	+				-0.5
3,578,839	-				-1.3
3,578,839	-				+0.4
3,578,839	-				+0.9
3,578,839	-				-1.0
3,578,839	-				+0.1
3,578,863	-				-0.9
3,578,933	-				-1.0
3,578,954	+				-0.3
3,578,962	-				+0.2
3,578,977	-				-0.1
3,579,090	+				+1.7
3,579,096	-				-0.4
3,579,098	-				-0.1
3,579,113	-				+0.3
3,579,243	-				-1.4
3,579,306	+				-0.1
3,579,320	-				-1.2
3,579,337	-		Shewana3_2978	0.11	+0.5
3,579,437	-		Shewana3_2978	0.19	+0.5
3,579,583	-		Shewana3_2978	0.30	-1.3
3,579,613	-		Shewana3_2978	0.33	-0.1
3,579,635	+		Shewana3_2978	0.35	-1.1
3,579,635	+		Shewana3_2978	0.35	-0.8
3,579,635	+		Shewana3_2978	0.35	-1.6
3,579,681	-		Shewana3_2978	0.38	+0.1
3,579,807	-		Shewana3_2978	0.48	-1.2
3,579,871	+		Shewana3_2978	0.53	+1.2
3,579,897	-		Shewana3_2978	0.56	-1.8
3,579,926	+		Shewana3_2978	0.58	+0.2
3,579,977	+		Shewana3_2978	0.62	+0.3
3,579,991	+		Shewana3_2978	0.63	+2.3
3,579,999	-		Shewana3_2978	0.64	-0.6
3,580,024	+		Shewana3_2978	0.66	-1.2
3,580,126	+		Shewana3_2978	0.74	-1.8
3,580,161	-		Shewana3_2978	0.77	+0.2
3,580,161	-		Shewana3_2978	0.77	+0.3
3,580,163	-		Shewana3_2978	0.77	+1.7
3,580,163	-		Shewana3_2978	0.77	-0.6
3,580,229	+		Shewana3_2978	0.82	-0.5
3,580,304	-		Shewana3_2978	0.88	-2.4
3,580,327	+				+2.3
3,580,351	-				-0.5
3,580,454	-				-0.4
3,580,564	+		Shewana3_2979	0.26	+0.7
3,580,591	-		Shewana3_2979	0.32	+0.7
3,580,867	+		Shewana3_2979	0.85	+4.9
3,580,873	-		Shewana3_2979	0.86	+1.7
3,580,888	-		Shewana3_2979	0.89	-1.1
3,580,890	+		Shewana3_2979	0.89	-2.0
3,580,890	+		Shewana3_2979	0.89	+1.3
3,580,898	-				-0.4
3,580,903	+				+1.0
3,580,903	+				+1.7
3,580,989	+				+3.3
3,581,104	+		Shewana3_2980	0.25	+0.6
3,581,316	-		Shewana3_2980	0.59	-0.3
3,581,326	-		Shewana3_2980	0.61	-0.9
3,581,370	-		Shewana3_2980	0.68	-0.5