Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2842

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
3,395,680	+		Shewana3_2841	0.60	-2.6
3,395,741	+		Shewana3_2841	0.63	+0.3
3,395,749	-		Shewana3_2841	0.63	-0.7
3,395,751	+		Shewana3_2841	0.64	-1.3
3,395,751	+		Shewana3_2841	0.64	-0.2
3,395,968	+		Shewana3_2841	0.73	-1.4
3,396,056	-		Shewana3_2841	0.77	-0.2
3,396,079	-		Shewana3_2841	0.78	-1.0
3,396,221	+		Shewana3_2841	0.84	-0.5
3,396,229	-		Shewana3_2841	0.85	-0.5
3,396,229	-		Shewana3_2841	0.85	-0.5
3,396,459	-				-0.7
3,396,642	+				-1.8
3,396,650	-				-1.8
3,396,811	-				+0.0
3,396,884	-				-0.5
3,396,884	-				-1.7
3,397,220	-		Shewana3_2842	0.11	-0.2
3,397,224	+		Shewana3_2842	0.11	-2.2
3,397,234	+		Shewana3_2842	0.11	-0.3
3,397,273	-		Shewana3_2842	0.12	+0.4
3,397,589	+		Shewana3_2842	0.17	-2.3
3,397,646	-		Shewana3_2842	0.18	+0.2
3,397,649	+		Shewana3_2842	0.18	-1.7
3,397,694	-		Shewana3_2842	0.19	+0.8
3,397,838	+		Shewana3_2842	0.21	-0.1
3,398,050	-		Shewana3_2842	0.25	+0.0
3,398,140	+		Shewana3_2842	0.26	-0.3
3,398,406	-		Shewana3_2842	0.31	+2.4
3,398,505	+		Shewana3_2842	0.32	-0.9
3,398,549	+		Shewana3_2842	0.33	-2.4
3,398,557	-		Shewana3_2842	0.33	-0.3
3,398,557	-		Shewana3_2842	0.33	-3.6
3,398,662	-		Shewana3_2842	0.35	-0.9
3,398,694	+		Shewana3_2842	0.35	+0.6
3,399,021	+		Shewana3_2842	0.41	+1.4
3,399,048	+		Shewana3_2842	0.41	-1.5
3,399,106	+		Shewana3_2842	0.42	-1.0
3,399,114	-		Shewana3_2842	0.42	+0.0
3,399,344	-		Shewana3_2842	0.46	+1.0
3,399,354	-		Shewana3_2842	0.46	-1.2
3,399,362	-		Shewana3_2842	0.47	+1.4
3,399,390	+		Shewana3_2842	0.47	+0.2
3,399,642	-		Shewana3_2842	0.51	-0.7
3,399,652	-		Shewana3_2842	0.51	-1.5
3,399,662	-		Shewana3_2842	0.52	-1.9
3,399,695	+		Shewana3_2842	0.52	-0.7
3,399,752	-		Shewana3_2842	0.53	-1.2
3,399,762	-		Shewana3_2842	0.53	-1.9
3,399,953	+		Shewana3_2842	0.56	-0.2
3,400,244	-		Shewana3_2842	0.61	+0.3
3,400,328	+		Shewana3_2842	0.63	-0.3
3,400,344	+		Shewana3_2842	0.63	+2.0
3,400,472	+		Shewana3_2842	0.65	-0.3
3,400,610	+		Shewana3_2842	0.67	-0.2
3,400,618	-		Shewana3_2842	0.68	+1.8
3,400,822	-		Shewana3_2842	0.71	+1.0
3,400,880	+		Shewana3_2842	0.72	-2.5
3,400,922	-		Shewana3_2842	0.73	-0.9
3,401,333	-		Shewana3_2842	0.80	-1.6
3,401,390	+		Shewana3_2842	0.81	-1.3
3,401,554	-		Shewana3_2842	0.83	-0.5
3,401,674	+		Shewana3_2842	0.85	-2.0
3,401,682	-		Shewana3_2842	0.85	+1.2
3,401,741	+		Shewana3_2842	0.86	-0.9
3,401,741	+		Shewana3_2842	0.86	+2.2
3,401,749	-		Shewana3_2842	0.87	+0.4
3,401,827	+		Shewana3_2842	0.88	-1.1
3,402,089	+				-1.8
3,402,144	+				+1.6
3,402,145	+				-1.7
3,402,189	-				-1.3
3,402,204	+				-0.5
3,402,314	+				-2.6
3,402,340	-				+0.1
3,402,394	+				-1.0
3,402,488	-				+3.4
3,402,573	-				+0.0
3,402,636	-				+1.8
3,402,688	-				-2.0
3,402,698	-				-1.4
3,402,712	-				-0.6
3,402,853	-				+1.0
3,402,878	-		Shewana3_2843	0.11	+1.0
3,402,923	-		Shewana3_2843	0.14	-0.7
3,403,053	+		Shewana3_2843	0.22	+0.0
3,403,157	-		Shewana3_2843	0.28	+0.5
3,403,260	-		Shewana3_2843	0.34	+0.5
3,403,471	-		Shewana3_2843	0.47	-1.1