Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2758

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
3,291,239	-		Shewana3_2757	0.14	+1.0
3,291,352	-		Shewana3_2757	0.25	+0.1
3,291,533	-		Shewana3_2757	0.43	+0.5
3,291,533	-		Shewana3_2757	0.43	-0.1
3,291,556	-		Shewana3_2757	0.45	-0.1
3,291,578	-		Shewana3_2757	0.47	+0.5
3,291,738	+		Shewana3_2757	0.63	-1.2
3,292,111	+				-1.3
3,292,252	-				+0.8
3,292,303	+				+1.8
3,292,305	+				+2.3
3,292,313	+				+1.8
3,292,313	-				+0.3
3,292,313	-				+0.2
3,292,313	-				+1.8
3,292,321	-				+1.3
3,292,338	+				-0.7
3,292,338	+				+0.8
3,292,338	+				+0.8
3,292,343	+				+2.3
3,292,346	-				-0.5
3,292,346	-				+1.8
3,292,346	-				+1.3
3,292,378	+				+4.3
3,292,378	+				+1.3
3,292,378	+				+1.3
3,292,378	+				+0.0
3,292,378	+				-0.4
3,292,378	+				+1.3
3,292,386	-				+3.3
3,292,386	-				+2.3
3,292,386	-				+1.8
3,292,386	-				-1.0
3,292,386	-				+2.1
3,292,386	-				+3.3
3,292,386	-				+1.3
3,292,386	-				+0.8
3,292,392	+				+3.3
3,292,400	-				+1.3
3,292,413	-				-0.1
3,292,454	-		Shewana3_2758	0.10	+0.5
3,292,454	-		Shewana3_2758	0.10	+0.0
3,292,472	+		Shewana3_2758	0.11	-0.2
3,292,474	-		Shewana3_2758	0.11	-0.1
3,292,480	-		Shewana3_2758	0.11	+2.3
3,292,480	-		Shewana3_2758	0.11	-0.6
3,292,518	+		Shewana3_2758	0.13	+2.3
3,292,526	-		Shewana3_2758	0.13	+1.8
3,292,550	-		Shewana3_2758	0.14	+1.3
3,292,581	-		Shewana3_2758	0.15	+0.8
3,292,584	-		Shewana3_2758	0.15	+1.8
3,292,586	+		Shewana3_2758	0.15	-0.5
3,292,675	-		Shewana3_2758	0.18	+0.8
3,292,685	-		Shewana3_2758	0.19	+1.3
3,292,685	-		Shewana3_2758	0.19	+0.3
3,292,712	+		Shewana3_2758	0.20	+0.6
3,292,728	-		Shewana3_2758	0.20	+2.3
3,292,735	+		Shewana3_2758	0.21	+0.0
3,292,743	-		Shewana3_2758	0.21	+0.5
3,292,743	-		Shewana3_2758	0.21	+1.3
3,292,746	+		Shewana3_2758	0.21	+2.3
3,292,747	+		Shewana3_2758	0.21	+2.3
3,292,755	-		Shewana3_2758	0.21	+1.2
3,292,789	-		Shewana3_2758	0.23	-0.7
3,292,789	-		Shewana3_2758	0.23	+1.3
3,292,820	-		Shewana3_2758	0.24	+0.0
3,292,856	-		Shewana3_2758	0.25	+3.3
3,292,905	+		Shewana3_2758	0.27	+3.3
3,292,905	+		Shewana3_2758	0.27	+3.3
3,292,908	-		Shewana3_2758	0.27	+1.0
3,292,913	-		Shewana3_2758	0.27	+0.8
3,292,919	+		Shewana3_2758	0.28	+3.3
3,292,937	-		Shewana3_2758	0.28	+2.3
3,292,995	-		Shewana3_2758	0.30	+2.3
3,293,010	+		Shewana3_2758	0.31	+1.0
3,293,022	+		Shewana3_2758	0.31	-0.1
3,293,029	-		Shewana3_2758	0.32	+1.0
3,293,054	-		Shewana3_2758	0.33	+0.8
3,293,054	-		Shewana3_2758	0.33	+1.0
3,293,066	+		Shewana3_2758	0.33	+2.3
3,293,067	+		Shewana3_2758	0.33	-0.9
3,293,067	+		Shewana3_2758	0.33	+0.5
3,293,067	+		Shewana3_2758	0.33	+2.3
3,293,067	+		Shewana3_2758	0.33	+0.3
3,293,075	-		Shewana3_2758	0.33	-0.7
3,293,075	-		Shewana3_2758	0.33	+3.3
3,293,087	-		Shewana3_2758	0.34	+2.3
3,293,130	-		Shewana3_2758	0.35	+1.0
3,293,135	+		Shewana3_2758	0.36	+1.3
3,293,135	+		Shewana3_2758	0.36	+1.0
3,293,143	-		Shewana3_2758	0.36	+2.3
3,293,143	-		Shewana3_2758	0.36	-0.7
3,293,151	+		Shewana3_2758	0.36	+0.2
3,293,167	-		Shewana3_2758	0.37	+1.3
3,293,248	+		Shewana3_2758	0.40	+1.8
3,293,248	+		Shewana3_2758	0.40	-0.6
3,293,248	+		Shewana3_2758	0.40	-0.9
3,293,248	+		Shewana3_2758	0.40	+1.1
3,293,256	-		Shewana3_2758	0.40	+0.0
3,293,256	-		Shewana3_2758	0.40	+0.8
3,293,280	+		Shewana3_2758	0.41	+0.5
3,293,290	-		Shewana3_2758	0.41	+1.0
3,293,310	+		Shewana3_2758	0.42	-0.2
3,293,318	-		Shewana3_2758	0.42	+1.0
3,293,380	+		Shewana3_2758	0.45	+0.0
3,293,483	+		Shewana3_2758	0.48	-0.7
3,293,508	+		Shewana3_2758	0.49	-1.1
3,293,585	-		Shewana3_2758	0.52	+0.3
3,293,601	-		Shewana3_2758	0.53	+0.9
3,293,632	-		Shewana3_2758	0.54	+1.2
3,293,708	-		Shewana3_2758	0.57	-0.1
3,293,848	+		Shewana3_2758	0.62	+1.3
3,293,850	+		Shewana3_2758	0.62	+1.9
3,293,856	-		Shewana3_2758	0.62	+1.3
3,294,033	+		Shewana3_2758	0.69	+0.8
3,294,563	+		Shewana3_2758	0.89	+0.3
3,294,583	+		Shewana3_2758	0.89	+0.4
3,294,654	-				-0.4
3,294,756	-				-0.4
3,294,805	+				-0.9
3,294,838	-				+1.1
3,294,924	-				-0.4
3,295,030	+				+0.2
3,295,065	+				+1.3
3,295,402	-		Shewana3_2759	0.40	+0.8
3,295,485	-		Shewana3_2759	0.49	+0.0
3,295,553	+		Shewana3_2759	0.57	+0.6
3,295,589	+		Shewana3_2759	0.61	+0.7
3,295,789	+		Shewana3_2759	0.83	+0.2
3,295,858	-				-0.3