Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2715
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,244,978 | - | Shewana3_2714 | 0.52 | -0.6 | |
3,244,983 | - | Shewana3_2714 | 0.52 | -1.1 | |
3,245,028 | - | Shewana3_2714 | 0.57 | -1.4 | |
3,245,091 | - | Shewana3_2714 | 0.64 | -0.8 | |
3,245,132 | - | Shewana3_2714 | 0.68 | -0.6 | |
3,245,174 | - | Shewana3_2714 | 0.72 | -2.3 | |
3,245,206 | - | Shewana3_2714 | 0.75 | -0.9 | |
3,245,367 | - | -0.6 | |||
3,245,569 | - | -0.6 | |||
3,245,574 | - | +1.0 | |||
3,245,592 | - | -0.9 | |||
3,245,647 | - | +0.0 | |||
3,245,732 | - | Shewana3_2715 | 0.11 | -1.3 | |
3,245,807 | - | Shewana3_2715 | 0.19 | -1.6 | |
3,245,895 | + | Shewana3_2715 | 0.27 | -0.4 | |
3,246,399 | - | Shewana3_2715 | 0.75 | -0.6 | |
3,246,628 | - | -2.0 | |||
3,246,804 | + | +1.8 | |||
3,246,810 | - | +0.2 | |||
3,246,818 | + | +1.3 | |||
3,247,047 | - | -0.1 | |||
3,247,331 | - | Shewana3_2716 | 0.30 | -0.3 | |
3,247,353 | - | Shewana3_2716 | 0.32 | -0.6 | |
3,247,360 | + | Shewana3_2716 | 0.32 | -1.0 | |
3,247,592 | + | Shewana3_2716 | 0.49 | -1.0 |
Or see this region's nucleotide sequence