Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2640

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
3,151,302	-				+1.3
3,151,359	-				-0.3
3,151,361	-				+3.3
3,151,363	+				+0.5
3,151,363	+				+3.3
3,151,363	+				+1.3
3,151,363	+				+1.7
3,151,371	-				+1.0
3,151,455	+				+1.7
3,151,489	-				+3.3
3,151,494	-				+2.0
3,151,508	+				-0.1
3,151,527	+				+1.0
3,151,527	+				+3.3
3,151,535	-				+1.7
3,151,745	+				+1.0
3,151,756	+				-1.2
3,151,770	+				+3.3
3,151,804	+				+1.5
3,151,813	+				+1.0
3,151,821	-				+1.3
3,151,833	+				+1.0
3,151,834	+				-0.9
3,151,836	+				+1.0
3,151,844	+				+1.9
3,151,849	+				-0.2
3,151,861	-				+0.5
3,151,880	+				+0.1
3,151,880	+				-0.0
3,151,880	+				+0.1
3,151,880	+				+1.5
3,151,888	-				+3.3
3,151,888	-				+1.3
3,151,888	-				+1.7
3,151,888	-				-0.1
3,151,889	-				-0.8
3,151,893	+				+2.7
3,151,990	+		Shewana3_2640	0.11	-0.0
3,152,075	-		Shewana3_2640	0.15	+1.7
3,152,138	+		Shewana3_2640	0.17	+1.7
3,152,150	+		Shewana3_2640	0.18	+1.7
3,152,159	+		Shewana3_2640	0.18	+1.3
3,152,159	+		Shewana3_2640	0.18	+0.5
3,152,167	-		Shewana3_2640	0.19	+1.7
3,152,222	+		Shewana3_2640	0.21	+0.1
3,152,222	+		Shewana3_2640	0.21	-0.4
3,152,225	+		Shewana3_2640	0.21	+1.0
3,152,254	+		Shewana3_2640	0.22	+5.9
3,152,259	+		Shewana3_2640	0.22	+1.0
3,152,267	-		Shewana3_2640	0.23	-0.7
3,152,274	+		Shewana3_2640	0.23	-0.0
3,152,282	-		Shewana3_2640	0.23	+2.3
3,152,336	+		Shewana3_2640	0.26	-0.0
3,152,362	+		Shewana3_2640	0.27	-0.0
3,152,362	+		Shewana3_2640	0.27	+0.9
3,152,362	+		Shewana3_2640	0.27	-0.6
3,152,364	-		Shewana3_2640	0.27	-0.8
3,152,367	+		Shewana3_2640	0.27	+2.3
3,152,370	-		Shewana3_2640	0.27	+1.3
3,152,370	-		Shewana3_2640	0.27	+0.7
3,152,370	-		Shewana3_2640	0.27	+0.1
3,152,370	-		Shewana3_2640	0.27	+0.3
3,152,377	+		Shewana3_2640	0.27	-0.0
3,152,383	-		Shewana3_2640	0.28	-1.7
3,152,463	+		Shewana3_2640	0.31	+1.3
3,152,477	+		Shewana3_2640	0.32	+1.3
3,152,497	+		Shewana3_2640	0.33	-1.4
3,152,497	+		Shewana3_2640	0.33	+3.3
3,152,497	+		Shewana3_2640	0.33	+0.3
3,152,500	-		Shewana3_2640	0.33	+0.3
3,152,505	-		Shewana3_2640	0.33	+2.3
3,152,505	-		Shewana3_2640	0.33	-0.7
3,152,505	-		Shewana3_2640	0.33	+3.3
3,152,505	-		Shewana3_2640	0.33	+0.5
3,152,505	-		Shewana3_2640	0.33	+0.0
3,152,542	-		Shewana3_2640	0.34	+1.9
3,152,546	+		Shewana3_2640	0.35	+1.7
3,152,605	-		Shewana3_2640	0.37	-1.0
3,152,665	+		Shewana3_2640	0.40	+0.9
3,152,727	+		Shewana3_2640	0.42	+2.0
3,152,735	-		Shewana3_2640	0.43	+2.3
3,152,826	+		Shewana3_2640	0.47	+0.5
3,152,838	+		Shewana3_2640	0.47	+0.7
3,152,838	+		Shewana3_2640	0.47	+1.3
3,152,974	+		Shewana3_2640	0.53	-0.4
3,152,974	+		Shewana3_2640	0.53	+1.3
3,152,974	+		Shewana3_2640	0.53	+0.5
3,152,984	+		Shewana3_2640	0.53	-0.4
3,152,992	-		Shewana3_2640	0.54	+2.3
3,153,021	+		Shewana3_2640	0.55	-0.0
3,153,112	-		Shewana3_2640	0.59	+1.0
3,153,138	-		Shewana3_2640	0.60	-0.1
3,153,264	-		Shewana3_2640	0.65	-0.5
3,153,292	-		Shewana3_2640	0.66	+1.3
3,153,320	-		Shewana3_2640	0.68	+1.7
3,153,379	-		Shewana3_2640	0.70	+0.2
3,153,425	-		Shewana3_2640	0.72	-1.1
3,153,435	-		Shewana3_2640	0.72	-0.8
3,153,562	-		Shewana3_2640	0.78	+0.5
3,153,576	-		Shewana3_2640	0.79	+3.3
3,153,582	+				+3.3
3,153,587	+		Shewana3_2640	0.79	+1.7
3,153,588	+		Shewana3_2640	0.79	+2.3
3,153,588	+		Shewana3_2640	0.79	+1.7
3,153,596	-		Shewana3_2640	0.79	+1.7
3,153,601	-		Shewana3_2640	0.80	+3.3
3,153,615	+		Shewana3_2640	0.80	-0.0
3,153,623	+		Shewana3_2640	0.81	+2.3
3,153,623	+		Shewana3_2640	0.81	+2.3
3,153,623	+		Shewana3_2640	0.81	+1.0
3,153,623	+				+3.3
3,153,623	+		Shewana3_2640	0.81	+1.7
3,153,623	+		Shewana3_2640	0.81	+1.2
3,153,623	+		Shewana3_2640	0.81	+3.3
3,153,623	+		Shewana3_2640	0.81	+0.3
3,153,623	+		Shewana3_2640	0.81	-0.0
3,153,623	+		Shewana3_2640	0.81	+2.3
3,153,623	+		Shewana3_2640	0.81	+2.3
3,153,631	-		Shewana3_2640	0.81	+0.1
3,153,631	-		Shewana3_2640	0.81	+0.3
3,153,631	-		Shewana3_2640	0.81	+1.0
3,153,631	-		Shewana3_2640	0.81	+1.3
3,153,665	+		Shewana3_2640	0.82	-0.6
3,153,674	-		Shewana3_2640	0.83	+2.0
3,153,712	+		Shewana3_2640	0.84	+1.3
3,153,720	-		Shewana3_2640	0.85	+0.6
3,153,720	-		Shewana3_2640	0.85	+1.0
3,153,722	-		Shewana3_2640	0.85	-1.2
3,153,735	+		Shewana3_2640	0.85	-0.3
3,153,791	-		Shewana3_2640	0.88	+1.7
3,153,791	-		Shewana3_2640	0.88	-1.3
3,153,810	+		Shewana3_2640	0.88	+0.1
3,153,810	+		Shewana3_2640	0.88	+1.3
3,153,826	-		Shewana3_2640	0.89	-0.3
3,153,859	+				-0.1
3,153,859	-				+1.6
3,153,864	-				-0.6
3,153,882	+				-0.5
3,153,890	-				-1.1
3,153,939	+				-0.0
3,153,951	+				+0.7
3,153,959	-				-0.1
3,153,959	-				-1.2
3,153,959	-				+1.3
3,153,959	-				+1.7
3,153,959	-				-0.9
3,153,959	-				-0.7
3,153,959	-				+1.1
3,153,959	-				+2.3
3,154,005	-				-0.0
3,154,005	-				-0.0
3,154,050	-				+0.5
3,154,166	-				+0.8
3,154,180	-				+1.6
3,154,242	-		Shewana3_2641	0.11	-0.4
3,154,242	-		Shewana3_2641	0.11	+0.7
3,154,264	+		Shewana3_2641	0.13	+2.3
3,154,272	-		Shewana3_2641	0.13	+1.2
3,154,334	+		Shewana3_2641	0.18	-0.3
3,154,372	+		Shewana3_2641	0.21	+2.0
3,154,447	-		Shewana3_2641	0.27	-0.2
3,154,517	-		Shewana3_2641	0.33	+1.6
3,154,698	+		Shewana3_2641	0.47	-2.0
3,154,706	-		Shewana3_2641	0.47	+1.7
3,154,739	+		Shewana3_2641	0.50	+0.6
3,155,008	+		Shewana3_2641	0.71	+0.1