Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2513
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,002,537 | - | Shewana3_2512 | 0.36 | -0.3 | |
3,002,876 | - | Shewana3_2512 | 0.75 | +0.2 | |
3,002,881 | - | Shewana3_2512 | 0.76 | -1.1 | |
3,002,889 | - | Shewana3_2512 | 0.77 | +0.4 | |
3,003,166 | + | +1.7 | |||
3,003,208 | + | -0.2 | |||
3,003,237 | + | -0.2 | |||
3,003,391 | + | +0.5 | |||
3,003,394 | + | +0.2 | |||
3,003,402 | - | +0.9 | |||
3,003,404 | + | +1.2 | |||
3,003,404 | + | -0.7 | |||
3,003,404 | + | -1.8 | |||
3,003,416 | + | +1.0 | |||
3,003,431 | - | -0.8 | |||
3,003,960 | - | Shewana3_2513 | 0.82 | -1.1 | |
3,004,201 | - | -0.6 | |||
3,004,592 | + | +1.2 | |||
3,004,600 | - | +2.2 | |||
3,004,600 | - | +3.2 | |||
3,004,613 | + | +2.2 | |||
3,004,680 | + | mdoG | Shewana3_2514 | 0.11 | +0.7 |
3,004,936 | - | mdoG | Shewana3_2514 | 0.27 | -0.1 |
3,004,998 | + | mdoG | Shewana3_2514 | 0.31 | +0.4 |
Or see this region's nucleotide sequence