Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2441
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,926,872 | + | hemH | Shewana3_2440 | 0.34 | +2.2 |
2,926,877 | + | hemH | Shewana3_2440 | 0.34 | +0.7 |
2,926,877 | + | hemH | Shewana3_2440 | 0.34 | +0.6 |
2,926,877 | + | hemH | Shewana3_2440 | 0.34 | +1.4 |
2,926,880 | - | hemH | Shewana3_2440 | 0.35 | +0.7 |
2,926,885 | - | hemH | Shewana3_2440 | 0.35 | +1.6 |
2,927,034 | + | hemH | Shewana3_2440 | 0.49 | -1.2 |
2,927,140 | + | hemH | Shewana3_2440 | 0.60 | +0.6 |
2,927,296 | + | hemH | Shewana3_2440 | 0.74 | -0.1 |
2,927,355 | + | hemH | Shewana3_2440 | 0.80 | +0.9 |
2,927,363 | - | hemH | Shewana3_2440 | 0.81 | +0.2 |
2,927,414 | - | hemH | Shewana3_2440 | 0.86 | +2.2 |
2,928,434 | + | +1.6 | |||
2,928,561 | + | Shewana3_2442 | 0.15 | +0.0 | |
2,928,571 | - | Shewana3_2442 | 0.17 | +0.1 | |
2,928,792 | + | Shewana3_2442 | 0.42 | +1.6 | |
2,928,914 | + | Shewana3_2442 | 0.56 | +0.9 | |
2,929,185 | - | Shewana3_2442 | 0.88 | -2.0 |
Or see this region's nucleotide sequence