Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2320
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,792,300 | - | def | Shewana3_2319 | 0.30 | +0.1 |
2,792,306 | + | def | Shewana3_2319 | 0.31 | +2.0 |
2,792,903 | - | Shewana3_2320 | 0.14 | -1.1 | |
2,792,913 | - | Shewana3_2320 | 0.17 | -1.4 | |
2,793,055 | - | Shewana3_2320 | 0.47 | -0.7 | |
2,793,072 | + | Shewana3_2320 | 0.51 | +2.0 | |
2,793,215 | - | Shewana3_2320 | 0.82 | +0.0 | |
2,793,327 | - | -0.1 | |||
2,793,349 | - | +0.5 | |||
2,793,473 | - | +2.0 | |||
2,793,717 | - | Shewana3_2321 | 0.36 | -0.5 | |
2,793,723 | + | Shewana3_2321 | 0.37 | -0.4 | |
2,793,765 | + | Shewana3_2321 | 0.42 | -2.1 | |
2,793,928 | - | Shewana3_2321 | 0.62 | +3.4 | |
2,793,990 | - | Shewana3_2321 | 0.69 | +0.4 | |
2,794,043 | + | Shewana3_2321 | 0.76 | +0.4 |
Or see this region's nucleotide sequence