Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2296
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,759,061 | + | Shewana3_2295 | 0.43 | +3.0 | |
2,759,164 | + | Shewana3_2295 | 0.51 | +2.5 | |
2,759,373 | - | Shewana3_2295 | 0.66 | +2.1 | |
2,759,606 | + | Shewana3_2295 | 0.83 | +3.2 | |
2,759,702 | + | +2.7 | |||
2,759,833 | + | -0.1 | |||
2,760,051 | - | Shewana3_2296 | 0.14 | +0.1 | |
2,760,076 | + | Shewana3_2296 | 0.17 | -0.4 | |
2,760,084 | - | Shewana3_2296 | 0.18 | +1.1 | |
2,760,084 | - | Shewana3_2296 | 0.18 | -0.2 | |
2,760,094 | - | Shewana3_2296 | 0.19 | +0.5 | |
2,760,110 | + | Shewana3_2296 | 0.22 | +0.1 | |
2,760,165 | - | Shewana3_2296 | 0.29 | -0.2 | |
2,760,464 | - | Shewana3_2296 | 0.70 | +2.1 | |
2,760,466 | - | Shewana3_2296 | 0.70 | +0.3 | |
2,760,559 | - | Shewana3_2296 | 0.82 | +0.8 | |
2,760,860 | + | -0.1 | |||
2,760,964 | + | +0.1 | |||
2,760,964 | + | -0.1 | |||
2,760,972 | - | -0.4 | |||
2,761,050 | - | +0.4 |
Or see this region's nucleotide sequence