Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2153
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,578,341 | + | +1.3 | |||
2,578,382 | - | Shewana3_2152 | 0.12 | +4.1 | |
2,578,566 | - | +1.9 | |||
2,578,617 | + | Shewana3_2152 | 0.39 | +0.5 | |
2,578,625 | - | Shewana3_2152 | 0.40 | +1.9 | |
2,578,945 | + | Shewana3_2152 | 0.77 | +0.3 | |
2,579,039 | + | Shewana3_2152 | 0.88 | -0.1 | |
2,579,180 | - | +0.1 | |||
2,579,611 | + | Shewana3_2153 | 0.20 | -1.1 | |
2,579,767 | - | Shewana3_2153 | 0.31 | +0.3 | |
2,580,109 | + | Shewana3_2153 | 0.55 | -1.1 | |
2,580,223 | + | Shewana3_2153 | 0.62 | -2.3 | |
2,580,407 | + | Shewana3_2153 | 0.75 | +0.1 | |
2,580,735 | + | -2.1 | |||
2,580,950 | - | -0.9 | |||
2,580,998 | + | +2.9 | |||
2,581,374 | - | Shewana3_2154 | 0.21 | -0.8 |
Or see this region's nucleotide sequence