Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2096
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,515,414 | - | Shewana3_2095 | 0.12 | +0.2 | |
| 2,515,416 | - | Shewana3_2095 | 0.12 | -0.5 | |
| 2,515,584 | - | Shewana3_2095 | 0.28 | +1.8 | |
| 2,515,827 | + | Shewana3_2095 | 0.51 | +0.5 | |
| 2,515,834 | + | Shewana3_2095 | 0.52 | +2.8 | |
| 2,515,999 | + | Shewana3_2095 | 0.67 | +0.1 | |
| 2,516,282 | + | -1.7 | |||
| 2,516,370 | - | -0.5 | |||
| 2,516,384 | + | -0.7 | |||
| 2,516,384 | + | -1.3 | |||
| 2,516,532 | + | Shewana3_2096 | 0.25 | -0.0 | |
| 2,516,639 | - | Shewana3_2096 | 0.38 | +0.2 | |
| 2,516,862 | + | Shewana3_2096 | 0.67 | +2.0 | |
| 2,517,274 | + | +0.2 | |||
| 2,517,282 | + | +0.1 | |||
| 2,517,509 | - | +5.2 | |||
| 2,517,527 | - | -0.5 | |||
| 2,517,696 | + | mukB | Shewana3_2097 | 0.13 | +1.5 |
| 2,517,925 | + | mukB | Shewana3_2097 | 0.18 | +1.2 |
| 2,518,054 | - | mukB | Shewana3_2097 | 0.21 | +1.8 |
Or see this region's nucleotide sequence