Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1947
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,314,765 | - | Shewana3_1946 | 0.52 | +0.9 | |
2,314,945 | - | Shewana3_1946 | 0.61 | -0.5 | |
2,314,992 | - | Shewana3_1946 | 0.63 | +2.9 | |
2,315,327 | - | Shewana3_1946 | 0.81 | +2.4 | |
2,315,404 | + | Shewana3_1946 | 0.85 | +2.9 | |
2,315,412 | - | Shewana3_1946 | 0.85 | +2.9 | |
2,315,642 | - | +1.3 | |||
2,315,896 | - | Shewana3_1947 | 0.23 | +0.4 | |
2,315,920 | - | Shewana3_1947 | 0.26 | +0.3 | |
2,315,999 | - | Shewana3_1947 | 0.34 | -0.8 | |
2,316,259 | - | Shewana3_1947 | 0.62 | +1.3 | |
2,316,469 | - | Shewana3_1947 | 0.84 | +0.9 | |
2,316,665 | + | +2.9 | |||
2,316,751 | - | -1.4 | |||
2,316,910 | - | Shewana3_1948 | 0.19 | -0.7 | |
2,316,985 | + | +2.9 | |||
2,317,101 | - | Shewana3_1948 | 0.32 | +0.9 |
Or see this region's nucleotide sequence