Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1927
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,291,713 | + | +1.9 | |||
2,291,742 | + | -0.4 | |||
2,291,752 | + | -1.6 | |||
2,291,760 | - | -0.7 | |||
2,291,873 | + | -0.6 | |||
2,291,910 | + | +0.4 | |||
2,291,911 | + | +0.3 | |||
2,291,918 | - | +0.9 | |||
2,291,918 | - | +0.2 | |||
2,292,109 | + | +0.1 | |||
2,292,127 | - | +2.9 | |||
2,292,190 | + | +1.6 | |||
2,292,253 | - | Shewana3_1926 | 0.17 | +0.1 | |
2,292,527 | + | +0.7 | |||
2,292,665 | - | Shewana3_1927 | 0.32 | -1.3 | |
2,292,769 | + | Shewana3_1927 | 0.54 | -0.1 | |
2,293,173 | + | Shewana3_1928 | 0.27 | -0.8 | |
2,293,173 | + | Shewana3_1928 | 0.27 | +0.7 | |
2,293,173 | + | Shewana3_1928 | 0.27 | -0.1 | |
2,293,181 | - | Shewana3_1928 | 0.28 | +1.3 | |
2,293,233 | + | Shewana3_1928 | 0.38 | +1.2 | |
2,293,241 | - | Shewana3_1928 | 0.40 | +1.1 | |
2,293,277 | + | Shewana3_1928 | 0.47 | +0.3 | |
2,293,387 | + | Shewana3_1928 | 0.68 | +1.9 | |
2,293,488 | + | Shewana3_1928 | 0.88 | +1.9 | |
2,293,764 | + | +1.3 |
Or see this region's nucleotide sequence