Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1686
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,980,050 | - | Shewana3_1685 | 0.18 | +3.1 | |
1,980,271 | + | Shewana3_1685 | 0.45 | -1.3 | |
1,980,468 | - | Shewana3_1685 | 0.69 | -0.3 | |
1,980,468 | - | Shewana3_1685 | 0.69 | -0.2 | |
1,980,622 | + | Shewana3_1685 | 0.88 | +1.0 | |
1,980,904 | - | -1.8 | |||
1,981,229 | + | Shewana3_1686 | 0.41 | +1.6 | |
1,981,242 | + | Shewana3_1686 | 0.43 | +0.6 | |
1,981,444 | + | Shewana3_1686 | 0.66 | +1.1 | |
1,981,494 | - | Shewana3_1686 | 0.71 | +2.1 | |
1,981,618 | + | Shewana3_1686 | 0.86 | +2.1 | |
1,981,777 | + | +3.1 | |||
1,981,999 | + | -0.8 | |||
1,982,007 | - | +0.3 | |||
1,982,007 | - | +0.1 | |||
1,982,187 | - | Shewana3_1687 | 0.12 | +3.1 | |
1,982,550 | + | Shewana3_1687 | 0.50 | -1.2 | |
1,982,593 | + | Shewana3_1687 | 0.55 | -0.6 | |
1,982,634 | + | Shewana3_1687 | 0.59 | +3.1 |
Or see this region's nucleotide sequence