Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1637
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,926,264 | - | Shewana3_1636 | 0.37 | -0.6 | |
1,926,382 | - | Shewana3_1636 | 0.45 | -1.2 | |
1,926,719 | + | Shewana3_1636 | 0.67 | +2.2 | |
1,926,719 | + | Shewana3_1636 | 0.67 | -1.2 | |
1,926,928 | - | Shewana3_1636 | 0.81 | +1.2 | |
1,927,068 | + | Shewana3_1636 | 0.90 | +0.5 | |
1,927,204 | - | -0.2 | |||
1,927,490 | + | Shewana3_1637 | 0.20 | -0.7 | |
1,927,630 | + | Shewana3_1637 | 0.31 | +0.8 | |
1,927,758 | - | Shewana3_1637 | 0.41 | -0.6 | |
1,927,853 | + | Shewana3_1637 | 0.49 | +1.2 | |
1,928,147 | - | Shewana3_1637 | 0.72 | -0.4 | |
1,928,287 | - | Shewana3_1637 | 0.83 | -1.2 | |
1,928,319 | - | Shewana3_1637 | 0.85 | +0.1 | |
1,928,778 | + | Shewana3_1638 | 0.11 | +0.6 | |
1,929,165 | + | Shewana3_1638 | 0.31 | -1.0 | |
1,929,320 | + | Shewana3_1638 | 0.39 | +2.2 | |
1,929,328 | - | Shewana3_1638 | 0.39 | -0.2 | |
1,929,335 | - | Shewana3_1638 | 0.40 | +0.8 | |
1,929,358 | - | Shewana3_1638 | 0.41 | +0.8 | |
1,929,441 | + | Shewana3_1638 | 0.45 | +0.8 |
Or see this region's nucleotide sequence