Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1626
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,914,371 | - | Shewana3_1625 | 0.30 | -0.1 | |
1,914,473 | - | Shewana3_1625 | 0.40 | +0.3 | |
1,914,884 | + | Shewana3_1625 | 0.84 | +1.4 | |
1,914,892 | - | Shewana3_1625 | 0.85 | +1.4 | |
1,914,922 | - | Shewana3_1625 | 0.88 | +0.0 | |
1,914,939 | + | -0.4 | |||
1,914,982 | - | +2.2 | |||
1,914,982 | - | -1.2 | |||
1,915,904 | + | +2.3 | |||
1,915,920 | - | +0.9 | |||
1,915,922 | + | -0.3 | |||
1,916,732 | + | Shewana3_1628 | 0.37 | -0.1 | |
1,916,745 | + | Shewana3_1628 | 0.39 | -0.3 | |
1,916,850 | + | Shewana3_1628 | 0.58 | +0.6 | |
1,916,850 | + | Shewana3_1628 | 0.58 | +0.5 | |
1,916,858 | - | Shewana3_1628 | 0.59 | +2.2 |
Or see this region's nucleotide sequence