Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1125

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
1,322,568	+		Shewana3_1124	0.24	+0.3
1,322,958	-		Shewana3_1124	0.64	-0.7
1,323,025	-		Shewana3_1124	0.70	-1.8
1,323,151	+		Shewana3_1124	0.83	+0.9
1,323,255	-				+1.4
1,323,581	+				+0.8
1,323,581	+				+1.7
1,323,688	+		Shewana3_1125	0.10	+0.1
1,323,688	+		Shewana3_1125	0.10	+2.1
1,323,696	-		Shewana3_1125	0.10	+0.3
1,323,711	+		Shewana3_1125	0.11	+5.3
1,323,831	-		Shewana3_1125	0.16	-0.0
1,323,831	-		Shewana3_1125	0.16	+1.4
1,323,885	+		Shewana3_1125	0.18	+0.9
1,323,933	+		Shewana3_1125	0.19	+3.7
1,323,940	-		Shewana3_1125	0.20	+1.7
1,324,082	+		Shewana3_1125	0.25	-1.3
1,324,442	+		Shewana3_1125	0.39	+1.2
1,324,489	-		Shewana3_1125	0.41	+1.6
1,324,719	-		Shewana3_1125	0.50	+0.5
1,324,995	+		Shewana3_1125	0.61	+4.1
1,325,003	-		Shewana3_1125	0.61	+0.6
1,325,003	-		Shewana3_1125	0.61	+1.5
1,325,199	+		Shewana3_1125	0.68	+0.8
1,325,247	-		Shewana3_1125	0.70	+1.6
1,325,258	-		Shewana3_1125	0.71	+1.9
1,325,258	-		Shewana3_1125	0.71	-0.4
1,325,293	-		Shewana3_1125	0.72	+3.5
1,325,338	-		Shewana3_1125	0.74	+0.0
1,325,338	-		Shewana3_1125	0.74	+1.1
1,325,338	-		Shewana3_1125	0.74	+1.1
1,325,700	-		Shewana3_1125	0.88	-0.6
1,325,775	+				+5.5
1,325,775	+				+0.8
1,325,783	-				+1.1
1,325,872	+				+1.1
1,325,892	-				+2.2
1,325,894	+				+4.0
1,325,902	-				+1.2
1,325,902	-				+5.6
1,326,052	+				+0.8
1,326,154	+				-0.1
1,326,261	+				-0.2
1,326,263	+				-0.4
1,326,269	-				+0.9
1,326,294	-				-0.3
1,326,377	+				-1.8
1,326,377	+				-4.4
1,326,385	-				-0.3
1,326,385	-				+1.8
1,326,476	+				-1.3
1,326,588	+	recA	Shewana3_1126	0.18	+2.7
1,326,626	+	recA	Shewana3_1126	0.21	-3.3
1,326,634	-	recA	Shewana3_1126	0.22	-0.0
1,326,942	+	recA	Shewana3_1126	0.51	+1.8