Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1038
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,213,430 | - | prfC | Shewana3_1037 | 0.68 | +0.8 |
1,213,592 | + | prfC | Shewana3_1037 | 0.78 | +0.5 |
1,214,184 | + | -0.3 | |||
1,214,199 | - | +0.3 | |||
1,214,523 | - | Shewana3_1038 | 0.42 | +1.3 | |
1,214,616 | - | Shewana3_1038 | 0.55 | +1.4 | |
1,215,070 | + | +0.5 | |||
1,215,070 | + | +2.4 | |||
1,215,078 | - | -1.4 | |||
1,215,281 | + | Shewana3_1039 | 0.11 | +0.3 | |
1,215,628 | + | Shewana3_1039 | 0.39 | -0.2 | |
1,215,857 | - | Shewana3_1039 | 0.57 | -1.3 | |
1,215,882 | + | Shewana3_1039 | 0.59 | -1.4 | |
1,215,915 | - | Shewana3_1039 | 0.61 | +2.4 |
Or see this region's nucleotide sequence