Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0927

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
1,082,140	+		Shewana3_0926	0.11	-1.0
1,082,160	-		Shewana3_0926	0.16	-1.0
1,082,192	+		Shewana3_0926	0.25	-0.3
1,082,192	+		Shewana3_0926	0.25	-0.3
1,082,194	-		Shewana3_0926	0.25	-0.5
1,082,200	-		Shewana3_0926	0.27	+0.5
1,082,201	-		Shewana3_0926	0.27	+0.5
1,082,201	-		Shewana3_0926	0.27	+0.5
1,082,204	+		Shewana3_0926	0.28	-1.4
1,082,212	-		Shewana3_0926	0.30	-1.1
1,082,212	-		Shewana3_0926	0.30	-0.2
1,082,212	-		Shewana3_0926	0.30	+0.4
1,082,212	-		Shewana3_0926	0.30	+0.5
1,082,230	+		Shewana3_0926	0.34	+0.7
1,082,231	+		Shewana3_0926	0.35	-0.4
1,082,237	+		Shewana3_0926	0.36	+1.9
1,082,238	-		Shewana3_0926	0.36	-1.6
1,082,245	-		Shewana3_0926	0.38	-0.6
1,082,251	+		Shewana3_0926	0.40	+1.2
1,082,256	+		Shewana3_0926	0.41	+0.5
1,082,264	-		Shewana3_0926	0.43	+1.1
1,082,285	+		Shewana3_0926	0.49	-0.9
1,082,342	-		Shewana3_0926	0.63	+0.8
1,082,344	+		Shewana3_0926	0.64	+0.5
1,082,344	+		Shewana3_0926	0.64	+0.6
1,082,344	+		Shewana3_0926	0.64	-1.0
1,082,344	+		Shewana3_0926	0.64	+0.3
1,082,344	+		Shewana3_0926	0.64	+0.5
1,082,344	+		Shewana3_0926	0.64	+0.0
1,082,344	+		Shewana3_0926	0.64	+0.9
1,082,344	+		Shewana3_0926	0.64	-0.8
1,082,344	+		Shewana3_0926	0.64	-0.7
1,082,344	+		Shewana3_0926	0.64	+0.4
1,082,352	-		Shewana3_0926	0.66	-1.2
1,082,352	-		Shewana3_0926	0.66	-0.7
1,082,352	-		Shewana3_0926	0.66	-0.2
1,082,352	-		Shewana3_0926	0.66	-0.4
1,082,352	-		Shewana3_0926	0.66	-0.6
1,082,352	-		Shewana3_0926	0.66	-0.4
1,082,355	+		Shewana3_0926	0.67	+0.6
1,082,368	-		Shewana3_0926	0.70	+0.9
1,082,386	+		Shewana3_0926	0.75	+0.8
1,082,386	-		Shewana3_0926	0.75	+1.1
1,082,402	-		Shewana3_0926	0.79	+1.0
1,082,410	-		Shewana3_0926	0.81	+0.1
1,082,410	-		Shewana3_0926	0.81	-1.8
1,082,412	+		Shewana3_0926	0.81	-0.3
1,082,449	+				-0.1
1,082,496	+				-1.6
1,082,497	-				-0.1
1,082,514	-				+2.3
1,082,577	-				-0.2
1,082,579	-				+0.6
1,082,580	+				-1.4
1,082,580	+				+0.1
1,082,638	+				+3.5
1,082,699	-				-0.3
1,082,720	+				+0.9
1,082,764	+				-0.4
1,082,764	+				+1.3
1,082,764	+				+0.1
1,082,764	+				-0.2
1,082,764	+				-0.9
1,082,772	-				-0.2
1,082,772	-				-0.2
1,082,772	-				+1.0
1,082,772	-				+1.6
1,082,774	+				+0.7
1,082,774	+				+0.9
1,082,774	+				-1.3
1,082,774	-				-0.4
1,082,781	+				-0.7
1,082,782	-				-1.6
1,082,782	-				-0.2
1,082,782	-				+1.1
1,082,782	-				-2.2
1,082,782	-				-0.6
1,082,782	-				+0.4
1,082,788	-				-1.5
1,082,809	+				-0.3
1,082,828	-				+1.9
1,082,830	+				+0.1
1,082,929	+				-1.2
1,082,934	+				+0.2
1,082,942	+				-1.9
1,082,942	-				-0.2
1,082,944	+				-0.2
1,082,949	+				+0.8
1,082,949	+				-0.3
1,082,949	+				-1.0
1,082,949	+				-0.2
1,082,949	+				+0.2
1,082,951	+				-1.1
1,082,956	+				-0.4
1,082,956	+				+0.5
1,082,956	+				-0.0
1,082,956	+				-1.0
1,082,956	+				-0.7
1,082,956	+				+2.5
1,082,956	+				-0.5
1,082,957	-				-1.8
1,082,957	-				-0.3
1,082,964	-				+0.8
1,082,964	-				+0.1
1,082,964	-				-0.6
1,082,964	-				+1.2
1,082,964	-				+0.8
1,082,964	-				-0.1
1,082,988	+				+1.2
1,083,029	-				+0.5
1,083,094	-				-0.8
1,083,094	-				+0.8
1,083,094	-				-0.7
1,083,197	+				+0.4
1,083,240	+		Shewana3_0927	0.10	+0.7
1,083,254	-		Shewana3_0927	0.11	-0.8
1,083,311	-		Shewana3_0927	0.17	+0.4
1,083,365	-		Shewana3_0927	0.22	-2.3
1,083,421	+		Shewana3_0927	0.28	+0.1
1,083,429	-		Shewana3_0927	0.29	-0.7
1,083,488	+		Shewana3_0927	0.35	+0.3
1,083,498	+		Shewana3_0927	0.36	-0.3
1,083,533	+		Shewana3_0927	0.39	+0.3
1,083,578	+		Shewana3_0927	0.44	-1.1
1,083,637	+		Shewana3_0927	0.49	-0.8
1,083,637	+		Shewana3_0927	0.49	+0.2
1,083,817	-		Shewana3_0927	0.67	+0.2
1,083,902	+		Shewana3_0927	0.76	+0.6
1,083,945	+		Shewana3_0927	0.80	-1.5
1,084,017	-		Shewana3_0927	0.87	+2.0
1,084,087	+				-0.5
1,084,087	+				+0.2
1,084,093	-				-0.7
1,084,220	+				+0.2
1,084,335	-				+0.7
1,084,337	-		Shewana3_0928	0.10	-0.8
1,084,451	-		Shewana3_0928	0.19	-0.0
1,084,489	-		Shewana3_0928	0.21	+1.1
1,084,508	-		Shewana3_0928	0.23	-0.2
1,084,551	-		Shewana3_0928	0.26	+0.1
1,084,553	-		Shewana3_0928	0.26	-0.4
1,084,646	-		Shewana3_0928	0.33	+0.1
1,084,672	-		Shewana3_0928	0.35	-0.6
1,085,068	-		Shewana3_0928	0.65	+0.8
1,085,069	+		Shewana3_0928	0.65	-0.0
1,085,071	+		Shewana3_0928	0.65	-0.1
1,085,077	-		Shewana3_0928	0.65	-1.1
1,085,077	-		Shewana3_0928	0.65	-1.7