Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0894
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,040,207 | + | Shewana3_0893 | 0.21 | -0.0 | |
1,040,429 | - | Shewana3_0893 | 0.44 | +0.1 | |
1,040,526 | + | Shewana3_0893 | 0.54 | -0.7 | |
1,040,749 | - | Shewana3_0893 | 0.78 | +1.4 | |
1,041,110 | + | -0.1 | |||
1,041,110 | + | -0.9 | |||
1,041,110 | + | -0.6 | |||
1,041,110 | + | +0.4 | |||
1,041,110 | - | +0.2 | |||
1,041,118 | - | -2.1 | |||
1,041,118 | - | -0.6 | |||
1,041,118 | - | -0.6 | |||
1,041,158 | + | +0.4 | |||
1,041,178 | - | -0.4 | |||
1,041,614 | + | Shewana3_0894 | 0.29 | -1.6 | |
1,041,672 | + | Shewana3_0894 | 0.33 | -0.8 | |
1,042,007 | + | Shewana3_0894 | 0.56 | +1.1 | |
1,042,015 | - | Shewana3_0894 | 0.56 | -0.9 | |
1,042,027 | - | Shewana3_0894 | 0.57 | +1.2 | |
1,042,446 | - | Shewana3_0894 | 0.86 | +0.7 | |
1,042,485 | - | Shewana3_0894 | 0.89 | -1.5 | |
1,042,915 | - | -0.3 | |||
1,043,504 | + | Shewana3_0895 | 0.40 | +0.4 | |
1,043,542 | - | Shewana3_0895 | 0.42 | -0.4 |
Or see this region's nucleotide sequence