Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0797

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
916,043	-		Shewana3_0795	0.71	+0.6
916,043	-		Shewana3_0795	0.71	-1.3
916,099	+		Shewana3_0795	0.78	+0.1
916,133	+		Shewana3_0795	0.82	-1.9
916,189	+		Shewana3_0795	0.90	-0.5
916,222	-				+0.4
916,222	-				+4.6
916,222	-				+1.6
916,222	-				-0.3
916,222	-				+3.6
916,247	+				+8.2
916,249	+				-0.7
916,249	+				-0.4
916,249	+				-0.4
916,249	+				-1.3
916,249	+				-0.0
916,257	-				+1.0
916,257	-				+0.2
916,257	-				+2.6
916,257	-				+0.6
916,409	+				-0.8
916,414	+				-0.9
916,414	+				+0.1
916,524	-		Shewana3_0796	0.22	+2.6
916,564	+		Shewana3_0796	0.30	+0.5
916,564	+		Shewana3_0796	0.30	+1.2
916,564	+		Shewana3_0796	0.30	-0.1
916,572	-		Shewana3_0796	0.32	-1.1
916,572	-		Shewana3_0796	0.32	+2.0
916,572	-		Shewana3_0796	0.32	+0.6
916,633	+		Shewana3_0796	0.44	+0.4
916,641	-		Shewana3_0796	0.45	+0.6
916,641	-		Shewana3_0796	0.45	+0.7
916,641	-				+3.6
916,641	-		Shewana3_0796	0.45	+1.2
916,853	+		Shewana3_0796	0.88	-0.5
916,885	-				+2.6
917,022	-				+0.6
917,028	+				+2.0
917,058	+				-0.6
917,064	+				-1.7
917,066	-				-0.1
917,095	-				-0.2
917,102	+				-1.0
917,199	-				+0.1
917,234	-				+0.1
917,307	+				+2.6
917,628	+		Shewana3_0797	0.16	-0.8
917,677	-		Shewana3_0797	0.17	+0.8
917,947	-		Shewana3_0797	0.23	-0.2
918,345	+		Shewana3_0797	0.33	-0.4
918,426	-		Shewana3_0797	0.35	-0.0
918,446	+		Shewana3_0797	0.35	+0.7
918,602	-		Shewana3_0797	0.39	-2.2
918,636	+		Shewana3_0797	0.40	+1.8
918,636	+		Shewana3_0797	0.40	+0.7
918,697	-		Shewana3_0797	0.41	-0.3
918,729	-		Shewana3_0797	0.42	-0.1
918,782	-		Shewana3_0797	0.43	-0.3
918,799	-		Shewana3_0797	0.44	+0.5
918,867	+		Shewana3_0797	0.45	+0.2
918,995	-		Shewana3_0797	0.48	-0.5
919,061	+		Shewana3_0797	0.50	+0.1
919,261	+		Shewana3_0797	0.55	+0.5
919,460	-		Shewana3_0797	0.59	-1.5
919,460	-		Shewana3_0797	0.59	-0.3
919,704	-		Shewana3_0797	0.65	-0.1
919,725	+		Shewana3_0797	0.66	+2.6
919,748	-		Shewana3_0797	0.66	+6.8
919,785	-		Shewana3_0797	0.67	+0.9
919,806	-		Shewana3_0797	0.68	-0.9
919,828	+		Shewana3_0797	0.68	-0.1
919,975	-		Shewana3_0797	0.72	-1.0
920,004	+		Shewana3_0797	0.72	+0.2
920,059	+		Shewana3_0797	0.74	+0.2
920,100	+		Shewana3_0797	0.75	+0.9
920,108	-		Shewana3_0797	0.75	-0.9
920,172	+		Shewana3_0797	0.76	-0.0
920,182	+		Shewana3_0797	0.77	-0.6
920,190	-		Shewana3_0797	0.77	-0.3
920,205	+		Shewana3_0797	0.77	+4.0
920,205	+		Shewana3_0797	0.77	-0.4
920,282	+		Shewana3_0797	0.79	+0.8
920,290	-		Shewana3_0797	0.79	+0.8
920,290	-		Shewana3_0797	0.79	-0.6
920,290	-		Shewana3_0797	0.79	-0.5
920,453	+		Shewana3_0797	0.83	+2.6
920,461	-		Shewana3_0797	0.83	-0.1
920,675	-		Shewana3_0797	0.88	+2.2
921,089	+				-0.4
921,089	+				-0.2
921,097	-				+0.3
921,488	+		Shewana3_0798	0.24	-0.0
921,627	+		Shewana3_0798	0.52	+0.6
921,773	+		Shewana3_0798	0.82	-1.1
921,781	-		Shewana3_0798	0.83	+0.4
921,928	+				+0.5
921,984	-				-2.3
922,008	+		Shewana3_0799	0.12	-0.0
922,141	-		Shewana3_0799	0.32	+0.2
922,153	-		Shewana3_0799	0.34	-0.3
922,153	-		Shewana3_0799	0.34	-0.7