Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0019

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
21,895	+				+0.7
21,895	+				+0.2
21,976	+		Shewana3_0018	0.11	+0.1
21,976	+		Shewana3_0018	0.11	-0.3
22,020	+		Shewana3_0018	0.19	-0.1
22,025	+		Shewana3_0018	0.19	-1.4
22,226	-		Shewana3_0018	0.54	-1.8
22,271	+		Shewana3_0018	0.62	-0.5
22,313	+		Shewana3_0018	0.69	+0.1
22,340	+		Shewana3_0018	0.74	-0.5
22,353	+		Shewana3_0018	0.76	-0.2
22,353	+		Shewana3_0018	0.76	-0.2
22,541	+				-1.6
22,674	-				-0.6
22,684	-				-0.3
22,806	+				-0.1
22,814	-				-0.2
22,869	+				-0.5
22,883	-				+0.4
22,960	+		Shewana3_0019	0.12	-0.7
22,991	+		Shewana3_0019	0.13	-1.4
23,116	+		Shewana3_0019	0.17	-1.8
23,126	-		Shewana3_0019	0.17	-0.3
23,393	+		Shewana3_0019	0.26	-0.9
23,401	-		Shewana3_0019	0.26	-1.3
23,496	-		Shewana3_0019	0.29	-0.1
23,535	-		Shewana3_0019	0.30	-1.0
23,552	+		Shewana3_0019	0.31	-0.7
23,557	+		Shewana3_0019	0.31	-0.8
23,565	-		Shewana3_0019	0.31	+0.8
23,565	-		Shewana3_0019	0.31	+1.6
23,565	-		Shewana3_0019	0.31	+0.3
23,738	+		Shewana3_0019	0.37	-0.7
23,738	+		Shewana3_0019	0.37	-0.5
23,746	-		Shewana3_0019	0.37	-0.0
23,747	-		Shewana3_0019	0.37	+0.3
23,751	-		Shewana3_0019	0.37	-0.3
23,835	+		Shewana3_0019	0.40	+0.1
23,837	+		Shewana3_0019	0.40	-1.0
23,858	-		Shewana3_0019	0.40	+0.7
23,906	+		Shewana3_0019	0.42	-0.2
23,906	+		Shewana3_0019	0.42	+0.9
23,906	+		Shewana3_0019	0.42	-0.9
23,909	-		Shewana3_0019	0.42	-1.0
23,911	+		Shewana3_0019	0.42	+0.2
23,914	-		Shewana3_0019	0.42	+0.3
23,914	-		Shewana3_0019	0.42	+0.2
23,914	-		Shewana3_0019	0.42	-2.3
23,919	-		Shewana3_0019	0.42	-0.2
23,919	-		Shewana3_0019	0.42	+0.7
23,925	+		Shewana3_0019	0.42	+0.1
23,925	+		Shewana3_0019	0.42	-0.3
23,933	-		Shewana3_0019	0.43	+0.1
23,982	+		Shewana3_0019	0.44	-2.0
24,072	-		Shewana3_0019	0.47	-0.9
24,140	-		Shewana3_0019	0.49	-0.2
24,140	-		Shewana3_0019	0.49	+2.7
24,181	+		Shewana3_0019	0.50	-0.9
24,305	-		Shewana3_0019	0.54	-0.8
24,333	+		Shewana3_0019	0.55	+0.6
24,333	+		Shewana3_0019	0.55	-1.4
24,333	+		Shewana3_0019	0.55	-0.1
24,420	+		Shewana3_0019	0.58	-0.6
24,445	+		Shewana3_0019	0.59	+0.0
24,470	+		Shewana3_0019	0.59	-0.6
24,476	+		Shewana3_0019	0.60	+0.4
24,531	+		Shewana3_0019	0.61	-1.6
24,534	-		Shewana3_0019	0.61	+1.4
24,539	-		Shewana3_0019	0.62	+1.3
24,586	+		Shewana3_0019	0.63	-0.1
24,714	+		Shewana3_0019	0.67	-1.2
24,717	+		Shewana3_0019	0.67	+1.4
24,836	+		Shewana3_0019	0.71	-1.4
24,911	-		Shewana3_0019	0.73	-2.0
24,985	-		Shewana3_0019	0.76	-0.5
25,230	-		Shewana3_0019	0.83	-0.7
25,333	+		Shewana3_0019	0.87	-0.7
25,341	-		Shewana3_0019	0.87	-0.1
25,501	-				-0.3
25,686	+				-0.6
25,699	-				-0.3
25,763	+				+0.1
25,854	-				-0.7
25,896	+				-0.6
25,912	+				+0.5
25,919	-				-1.6
25,929	-				-1.1
25,955	-				-0.4
25,955	-				-0.4
26,087	-		Shewana3_0020	0.33	-0.7
26,111	-		Shewana3_0020	0.38	-0.7
26,250	+		Shewana3_0020	0.70	-0.3
26,293	+		Shewana3_0020	0.80	+7.4
26,301	-		Shewana3_0020	0.82	-0.3
26,301	-		Shewana3_0020	0.82	+0.2
26,301	-		Shewana3_0020	0.82	-0.5
26,398	-				+0.1
26,757	+				-0.8