Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4390

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
276,043	-		Shewana3_4388	0.30	+0.3
276,144	-		Shewana3_4388	0.57	-0.8
276,215	-		Shewana3_4388	0.75	-0.9
276,332	+				-1.0
276,429	-				+0.9
276,701	-		Shewana3_4389	0.87	-0.2
276,774	-				+6.1
277,103	-		Shewana3_4390	0.26	-0.5
277,109	+		Shewana3_4390	0.26	+0.2
277,272	+		Shewana3_4390	0.45	-0.9
277,703	-				-0.9
277,769	+				-1.0
277,820	-				+0.4
277,925	-				-0.5
277,943	+		Shewana3_4391	0.13	+0.8
277,951	-		Shewana3_4391	0.15	+0.2
277,978	+		Shewana3_4391	0.21	+0.4
277,991	-		Shewana3_4391	0.24	-0.8
277,991	-		Shewana3_4391	0.24	+0.9
278,024	+		Shewana3_4391	0.31	+0.9
278,024	+		Shewana3_4391	0.31	-0.3
278,032	-		Shewana3_4391	0.33	+0.4
278,062	-		Shewana3_4391	0.40	+1.1
278,116	+		Shewana3_4391	0.52	-0.2
278,126	-		Shewana3_4391	0.55	+0.1
278,129	-		Shewana3_4391	0.55	-1.3
278,176	-		Shewana3_4391	0.66	+2.0
278,199	+		Shewana3_4391	0.71	-0.4
278,206	+		Shewana3_4391	0.73	+0.1
278,214	-		Shewana3_4391	0.75	+1.0
278,214	-		Shewana3_4391	0.75	+4.3
278,217	+		Shewana3_4391	0.75	-0.4
278,287	-				+0.8
278,297	+				+0.3
278,302	+				+0.5
278,303	-				+1.6
278,311	-				-0.6
278,325	+				+0.0
278,325	+				+0.8
278,333	-				-0.3
278,365	+				+0.1
278,393	+				+0.4
278,393	+				-1.0
278,393	+				-0.3
278,396	+				-0.3
278,396	+				-0.6
278,396	+				+0.1
278,396	+				+6.5
278,396	+				-0.3
278,396	+				-0.0
278,396	+				-0.7
278,396	+				+0.6
278,396	-				-2.1
278,398	+				+0.8
278,398	+				+0.4
278,398	+				-2.1
278,401	-				+1.2
278,401	-				-0.3
278,401	-				-0.8
278,401	-				+1.2
278,404	-				-0.5
278,404	-				-1.1
278,404	-				+0.8
278,404	-				+0.2
278,404	-				-0.2
278,404	-				-2.2
278,404	-				+0.6
278,406	-				+0.2
278,406	-				-1.3
278,406	-				+0.5
278,412	+				-0.9
278,419	-				-1.3
278,430	+				+0.3
278,430	+				-0.5
278,438	+				-0.3
278,438	-				-0.7
278,438	-				+2.5
278,439	-				+1.6
278,443	+				-2.3
278,443	+				-0.4
278,443	+				+0.3
278,443	+				+1.2
278,443	+				+0.8
278,443	+				-0.8
278,443	+				-0.2
278,443	+				-0.2
278,443	+				+0.1
278,443	+				+0.9
278,443	+				-0.1
278,444	+				-0.3
278,446	-				+0.1
278,446	-				-1.1
278,451	-				+2.0
278,451	-				-1.4
278,451	-				+0.2
278,451	-				+0.9
278,451	-				-0.0
278,451	-				-0.8
278,452	-				+0.7
278,452	-				-0.7
278,453	+				-0.6
278,453	+				-0.3
278,453	+				-0.2
278,453	+				-0.9
278,453	+				+2.0
278,453	+				-1.3
278,453	+				-0.7
278,453	+				-0.7
278,456	-				+1.6
278,461	-				-0.1
278,461	-				+1.8
278,466	+				-0.7
278,467	+				+1.0
278,467	+				-0.8
278,467	+				+1.6
278,467	+				-2.1
278,467	+				-0.2
278,467	+				-0.6
278,467	+				-1.2
278,467	+				+2.9
278,467	+				+1.3
278,467	+				+2.0
278,467	+				+0.2
278,467	+				-0.3
278,475	-				-0.3
278,475	-				+0.3
278,475	-				+0.4
278,475	-				+0.3
278,475	-				+0.5
278,475	-				-0.5
278,475	-				+0.6
278,475	-				-0.0
278,475	-				-0.9
278,475	-				-0.1
278,475	-				+0.2
278,475	-				+0.7
278,475	-				-0.0
278,475	-				-1.2
278,475	-				-0.7
278,475	-				+0.3
278,475	-				-1.0
278,475	-				-0.8
278,475	-				+0.2
278,478	+				+0.7
278,501	+				+0.1
278,563	+				+0.6
278,563	+				+0.2
278,571	-				-0.5
278,571	-				-0.2
278,571	-				-0.0
278,573	+				+0.3
278,641	+				+2.0
278,641	+				+0.5
278,641	+				+0.8
278,646	-				-2.0
278,649	-				-0.4
278,650	+				+0.6
278,650	-				-1.0
278,653	+				-1.6