Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_855 and Pf1N1B4_856 overlap by 1 nucleotides Pf1N1B4_856 and Pf1N1B4_857 are separated by 12 nucleotides
Pf1N1B4_855 - FIG021952: putative membrane protein, at 984,780 to 985,820
_855
Pf1N1B4_856 - Type IV pilus biogenesis protein PilF, at 985,820 to 986,578
_856
Pf1N1B4_857 - Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-), at 986,591 to 987,739
_857
Position (kb) 985
986
987 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.851 kb on - strand at 984.930 kb on - strand, within Pf1N1B4_855 at 984.930 kb on - strand, within Pf1N1B4_855 at 984.930 kb on - strand, within Pf1N1B4_855 at 984.930 kb on - strand, within Pf1N1B4_855 at 985.485 kb on - strand, within Pf1N1B4_855 at 985.837 kb on - strand at 985.846 kb on - strand at 985.846 kb on - strand at 985.944 kb on - strand, within Pf1N1B4_856 at 985.944 kb on - strand, within Pf1N1B4_856 at 985.944 kb on - strand at 985.949 kb on - strand, within Pf1N1B4_856 at 985.987 kb on - strand, within Pf1N1B4_856 at 985.990 kb on - strand, within Pf1N1B4_856 at 985.990 kb on - strand, within Pf1N1B4_856 at 986.007 kb on + strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.008 kb on - strand, within Pf1N1B4_856 at 986.023 kb on - strand, within Pf1N1B4_856 at 986.023 kb on - strand, within Pf1N1B4_856 at 986.439 kb on + strand, within Pf1N1B4_856 at 986.461 kb on - strand, within Pf1N1B4_856 at 986.578 kb on + strand at 986.578 kb on + strand at 986.578 kb on + strand at 986.579 kb on - strand at 986.579 kb on - strand at 986.579 kb on - strand at 986.579 kb on - strand at 986.579 kb on - strand at 986.592 kb on + strand at 986.592 kb on + strand at 986.592 kb on + strand at 986.592 kb on + strand at 986.592 kb on + strand at 986.593 kb on - strand at 986.593 kb on - strand at 986.593 kb on - strand at 986.596 kb on + strand at 986.596 kb on + strand at 986.597 kb on - strand at 986.597 kb on - strand at 986.597 kb on - strand at 986.656 kb on - strand at 986.656 kb on - strand at 986.935 kb on - strand, within Pf1N1B4_857
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 984,851 - +0.7 984,851 - -0.2 984,851 - +3.3 984,851 - -2.5 984,851 - -0.5 984,851 - +1.7 984,851 - +0.1 984,851 - +0.1 984,851 - +1.4 984,851 - -0.1 984,851 - +1.1 984,851 - -0.9 984,851 - +0.5 984,930 - Pf1N1B4_855 0.14 +1.7 984,930 - Pf1N1B4_855 0.14 +0.8 984,930 - Pf1N1B4_855 0.14 +1.7 984,930 - Pf1N1B4_855 0.14 -0.5 985,485 - Pf1N1B4_855 0.68 +2.9 985,837 - +0.7 985,846 - -1.5 985,846 - +0.9 985,944 - Pf1N1B4_856 0.16 -0.0 985,944 - Pf1N1B4_856 0.16 +2.7 985,944 - +1.1 985,949 - Pf1N1B4_856 0.17 -0.0 985,987 - Pf1N1B4_856 0.22 -0.9 985,990 - Pf1N1B4_856 0.22 -0.9 985,990 - Pf1N1B4_856 0.22 -1.5 986,007 + Pf1N1B4_856 0.25 -1.7 986,008 - Pf1N1B4_856 0.25 -0.9 986,008 - Pf1N1B4_856 0.25 +0.1 986,008 - Pf1N1B4_856 0.25 -1.0 986,008 - Pf1N1B4_856 0.25 -2.2 986,008 - Pf1N1B4_856 0.25 +0.1 986,008 - Pf1N1B4_856 0.25 -1.2 986,008 - Pf1N1B4_856 0.25 -0.9 986,008 - Pf1N1B4_856 0.25 +0.1 986,008 - Pf1N1B4_856 0.25 +0.1 986,023 - Pf1N1B4_856 0.27 -0.1 986,023 - Pf1N1B4_856 0.27 +0.7 986,439 + Pf1N1B4_856 0.82 -0.9 986,461 - Pf1N1B4_856 0.84 +0.5 986,578 + +0.1 986,578 + -1.5 986,578 + -0.9 986,579 - -1.5 986,579 - -0.6 986,579 - +1.6 986,579 - +2.2 986,579 - +0.1 986,592 + -1.9 986,592 + +0.1 986,592 + +0.7 986,592 + -0.4 986,592 + +0.1 986,593 - -0.2 986,593 - +0.2 986,593 - -0.5 986,596 + +0.1 986,596 + +2.1 986,597 - -1.5 986,597 - +0.4 986,597 - -1.9 986,656 - +1.1 986,656 - +1.5 986,935 - Pf1N1B4_857 0.30 -1.5
Or see this region's nucleotide sequence