Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_622 and Pf1N1B4_623 are separated by 33 nucleotides Pf1N1B4_623 and Pf1N1B4_624 are separated by 379 nucleotides Pf1N1B4_624 and Pf1N1B4_625 are separated by 95 nucleotides
Pf1N1B4_622 - L-serine dehydratase (EC 4.3.1.17), at 720,585 to 721,961
_622
Pf1N1B4_623 - Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10), at 721,995 to 723,119
_623
Pf1N1B4_624 - Cold shock protein CspA, at 723,499 to 723,711
_624
Pf1N1B4_625 - FIG023103: Predicted transmembrane protein, at 723,807 to 724,295
_625
Position (kb) 721
722
723
724 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 721.015 kb on - strand, within Pf1N1B4_622 at 721.017 kb on + strand, within Pf1N1B4_622 at 721.018 kb on - strand, within Pf1N1B4_622 at 721.018 kb on - strand, within Pf1N1B4_622 at 721.143 kb on + strand, within Pf1N1B4_622 at 721.144 kb on - strand, within Pf1N1B4_622 at 721.144 kb on - strand, within Pf1N1B4_622 at 721.144 kb on - strand, within Pf1N1B4_622 at 721.144 kb on - strand, within Pf1N1B4_622 at 721.396 kb on - strand, within Pf1N1B4_622 at 721.396 kb on - strand, within Pf1N1B4_622 at 721.491 kb on + strand, within Pf1N1B4_622 at 721.491 kb on + strand, within Pf1N1B4_622 at 721.491 kb on + strand, within Pf1N1B4_622 at 721.491 kb on + strand, within Pf1N1B4_622 at 721.491 kb on + strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.492 kb on - strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.494 kb on + strand, within Pf1N1B4_622 at 721.495 kb on - strand, within Pf1N1B4_622 at 721.495 kb on - strand at 721.495 kb on - strand, within Pf1N1B4_622 at 721.495 kb on - strand, within Pf1N1B4_622 at 721.495 kb on - strand, within Pf1N1B4_622 at 721.495 kb on - strand, within Pf1N1B4_622 at 721.495 kb on - strand, within Pf1N1B4_622 at 721.495 kb on - strand, within Pf1N1B4_622 at 721.534 kb on + strand, within Pf1N1B4_622 at 721.535 kb on - strand, within Pf1N1B4_622 at 721.572 kb on + strand, within Pf1N1B4_622 at 721.572 kb on + strand, within Pf1N1B4_622 at 721.572 kb on + strand, within Pf1N1B4_622 at 721.573 kb on - strand at 721.573 kb on - strand, within Pf1N1B4_622 at 721.573 kb on - strand, within Pf1N1B4_622 at 721.573 kb on - strand, within Pf1N1B4_622 at 721.590 kb on - strand, within Pf1N1B4_622 at 721.590 kb on - strand, within Pf1N1B4_622 at 721.765 kb on + strand, within Pf1N1B4_622 at 721.765 kb on + strand, within Pf1N1B4_622 at 721.765 kb on + strand, within Pf1N1B4_622 at 721.765 kb on + strand, within Pf1N1B4_622 at 721.765 kb on + strand, within Pf1N1B4_622 at 721.766 kb on - strand, within Pf1N1B4_622 at 721.766 kb on - strand, within Pf1N1B4_622 at 721.766 kb on - strand, within Pf1N1B4_622 at 721.766 kb on - strand, within Pf1N1B4_622 at 721.766 kb on - strand, within Pf1N1B4_622 at 721.911 kb on + strand at 721.912 kb on - strand at 721.912 kb on - strand at 721.912 kb on - strand at 721.912 kb on - strand at 721.995 kb on - strand at 722.095 kb on - strand at 722.095 kb on - strand at 722.510 kb on + strand, within Pf1N1B4_623 at 722.510 kb on + strand, within Pf1N1B4_623 at 722.511 kb on - strand, within Pf1N1B4_623 at 722.892 kb on - strand, within Pf1N1B4_623 at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.015 kb on + strand at 723.016 kb on - strand at 723.016 kb on - strand at 723.016 kb on - strand at 723.016 kb on - strand at 723.016 kb on - strand at 723.016 kb on - strand at 723.076 kb on + strand at 723.105 kb on + strand at 723.105 kb on + strand at 723.106 kb on - strand at 723.108 kb on + strand at 723.131 kb on + strand at 723.131 kb on + strand at 723.132 kb on - strand at 723.132 kb on - strand at 723.132 kb on - strand at 723.133 kb on + strand at 723.134 kb on - strand at 723.134 kb on - strand at 723.219 kb on + strand at 723.219 kb on + strand at 723.219 kb on + strand at 723.219 kb on + strand at 723.220 kb on - strand at 723.221 kb on + strand at 723.266 kb on + strand at 723.388 kb on + strand at 723.388 kb on + strand at 723.388 kb on + strand at 723.388 kb on + strand at 723.388 kb on + strand at 723.388 kb on + strand at 723.389 kb on - strand at 723.395 kb on + strand at 723.395 kb on + strand at 723.395 kb on + strand at 723.395 kb on + strand at 723.395 kb on + strand at 723.396 kb on - strand at 723.399 kb on + strand at 723.399 kb on + strand at 723.400 kb on - strand at 723.400 kb on - strand at 723.421 kb on + strand at 723.422 kb on - strand at 723.445 kb on - strand at 723.695 kb on + strand at 723.695 kb on + strand at 723.695 kb on + strand at 723.737 kb on + strand at 723.766 kb on + strand at 723.766 kb on + strand at 723.767 kb on - strand at 723.775 kb on - strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.823 kb on + strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.824 kb on - strand at 723.882 kb on + strand, within Pf1N1B4_625 at 723.883 kb on - strand, within Pf1N1B4_625 at 723.883 kb on - strand, within Pf1N1B4_625 at 723.883 kb on - strand, within Pf1N1B4_625 at 723.896 kb on - strand, within Pf1N1B4_625 at 723.896 kb on - strand, within Pf1N1B4_625 at 723.930 kb on + strand, within Pf1N1B4_625 at 723.930 kb on + strand, within Pf1N1B4_625 at 723.931 kb on - strand, within Pf1N1B4_625 at 723.931 kb on - strand, within Pf1N1B4_625 at 723.931 kb on - strand, within Pf1N1B4_625 at 724.016 kb on - strand, within Pf1N1B4_625
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 721,015 - Pf1N1B4_622 0.31 -0.2 721,017 + Pf1N1B4_622 0.31 -1.0 721,018 - Pf1N1B4_622 0.31 +0.4 721,018 - Pf1N1B4_622 0.31 -0.7 721,143 + Pf1N1B4_622 0.41 -0.4 721,144 - Pf1N1B4_622 0.41 -0.4 721,144 - Pf1N1B4_622 0.41 -0.3 721,144 - Pf1N1B4_622 0.41 -0.0 721,144 - Pf1N1B4_622 0.41 +0.8 721,396 - Pf1N1B4_622 0.59 +2.5 721,396 - Pf1N1B4_622 0.59 -0.5 721,491 + Pf1N1B4_622 0.66 -0.8 721,491 + Pf1N1B4_622 0.66 +1.7 721,491 + Pf1N1B4_622 0.66 +1.0 721,491 + Pf1N1B4_622 0.66 -0.5 721,491 + Pf1N1B4_622 0.66 -0.0 721,492 - Pf1N1B4_622 0.66 -0.5 721,492 - Pf1N1B4_622 0.66 -1.0 721,492 - Pf1N1B4_622 0.66 +0.4 721,492 - Pf1N1B4_622 0.66 -0.0 721,492 - Pf1N1B4_622 0.66 +0.5 721,492 - Pf1N1B4_622 0.66 +1.0 721,492 - Pf1N1B4_622 0.66 -0.6 721,492 - Pf1N1B4_622 0.66 +1.4 721,492 - Pf1N1B4_622 0.66 +0.6 721,494 + Pf1N1B4_622 0.66 -0.0 721,494 + Pf1N1B4_622 0.66 +1.5 721,494 + +1.0 721,494 + Pf1N1B4_622 0.66 +0.3 721,494 + Pf1N1B4_622 0.66 -0.0 721,494 + Pf1N1B4_622 0.66 -0.6 721,494 + Pf1N1B4_622 0.66 -0.5 721,494 + Pf1N1B4_622 0.66 -0.8 721,494 + Pf1N1B4_622 0.66 -3.2 721,494 + Pf1N1B4_622 0.66 +1.2 721,494 + Pf1N1B4_622 0.66 -0.4 721,494 + Pf1N1B4_622 0.66 -2.9 721,494 + Pf1N1B4_622 0.66 -0.7 721,495 - Pf1N1B4_622 0.66 -0.0 721,495 - -0.4 721,495 - Pf1N1B4_622 0.66 -0.6 721,495 - Pf1N1B4_622 0.66 -0.0 721,495 - Pf1N1B4_622 0.66 +1.4 721,495 - Pf1N1B4_622 0.66 +0.3 721,495 - Pf1N1B4_622 0.66 -1.4 721,495 - Pf1N1B4_622 0.66 -1.0 721,534 + Pf1N1B4_622 0.69 -0.0 721,535 - Pf1N1B4_622 0.69 -0.0 721,572 + Pf1N1B4_622 0.72 -0.6 721,572 + Pf1N1B4_622 0.72 -1.6 721,572 + Pf1N1B4_622 0.72 +0.7 721,573 - -1.6 721,573 - Pf1N1B4_622 0.72 -1.6 721,573 - Pf1N1B4_622 0.72 -0.0 721,573 - Pf1N1B4_622 0.72 -0.2 721,590 - Pf1N1B4_622 0.73 +0.5 721,590 - Pf1N1B4_622 0.73 -2.4 721,765 + Pf1N1B4_622 0.86 +3.0 721,765 + Pf1N1B4_622 0.86 +2.5 721,765 + Pf1N1B4_622 0.86 -0.4 721,765 + Pf1N1B4_622 0.86 +1.0 721,765 + Pf1N1B4_622 0.86 +0.5 721,766 - Pf1N1B4_622 0.86 -1.4 721,766 - Pf1N1B4_622 0.86 -1.4 721,766 - Pf1N1B4_622 0.86 +0.4 721,766 - Pf1N1B4_622 0.86 -0.3 721,766 - Pf1N1B4_622 0.86 -1.0 721,911 + -0.4 721,912 - +0.2 721,912 - -0.0 721,912 - +0.5 721,912 - +0.8 721,995 - +3.3 722,095 - +0.4 722,095 - +0.6 722,510 + Pf1N1B4_623 0.46 +1.3 722,510 + Pf1N1B4_623 0.46 -1.4 722,511 - Pf1N1B4_623 0.46 -1.4 722,892 - Pf1N1B4_623 0.80 -0.0 723,015 + +2.3 723,015 + +1.0 723,015 + +1.2 723,015 + -0.4 723,015 + +0.2 723,015 + +0.5 723,015 + -0.0 723,015 + +0.4 723,015 + +0.8 723,015 + +0.4 723,016 - +0.1 723,016 - -0.0 723,016 - -0.0 723,016 - +1.2 723,016 - +0.2 723,016 - +1.7 723,076 + -0.8 723,105 + +0.1 723,105 + +0.3 723,106 - +0.1 723,108 + -1.6 723,131 + -0.5 723,131 + +0.4 723,132 - +0.8 723,132 - -0.0 723,132 - +1.0 723,133 + +1.3 723,134 - +0.4 723,134 - +1.5 723,219 + +1.7 723,219 + +0.2 723,219 + +0.2 723,219 + -0.3 723,220 - -0.3 723,221 + -2.2 723,266 + -0.0 723,388 + -0.0 723,388 + -0.0 723,388 + -2.0 723,388 + -0.0 723,388 + -0.0 723,388 + +0.4 723,389 - -0.2 723,395 + -0.8 723,395 + -1.6 723,395 + -1.0 723,395 + -0.4 723,395 + +1.0 723,396 - -0.0 723,399 + -0.2 723,399 + -0.0 723,400 - +0.2 723,400 - -0.0 723,421 + -0.6 723,422 - -1.6 723,445 - +0.5 723,695 + +0.4 723,695 + +0.9 723,695 + +3.4 723,737 + +2.0 723,766 + -0.6 723,766 + -2.0 723,767 - +0.5 723,775 - -1.0 723,823 + +0.9 723,823 + -0.0 723,823 + -1.0 723,823 + -1.6 723,823 + -0.8 723,823 + -1.6 723,823 + -1.3 723,823 + -1.0 723,823 + +2.1 723,823 + -0.4 723,823 + -0.0 723,823 + +0.5 723,824 - -0.0 723,824 - -0.7 723,824 - +0.5 723,824 - +0.2 723,824 - +1.0 723,824 - -1.6 723,824 - +0.2 723,824 - +0.3 723,824 - +1.1 723,824 - +0.7 723,882 + Pf1N1B4_625 0.15 -0.1 723,883 - Pf1N1B4_625 0.16 +0.5 723,883 - Pf1N1B4_625 0.16 -0.0 723,883 - Pf1N1B4_625 0.16 -1.0 723,896 - Pf1N1B4_625 0.18 -0.0 723,896 - Pf1N1B4_625 0.18 +0.4 723,930 + Pf1N1B4_625 0.25 +2.8 723,930 + Pf1N1B4_625 0.25 -0.6 723,931 - Pf1N1B4_625 0.25 +2.0 723,931 - Pf1N1B4_625 0.25 -2.4 723,931 - Pf1N1B4_625 0.25 +1.2 724,016 - Pf1N1B4_625 0.43 -0.0
Or see this region's nucleotide sequence