Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5987 and Pf1N1B4_5988 overlap by 4 nucleotides Pf1N1B4_5988 and Pf1N1B4_5989 overlap by 28 nucleotides Pf1N1B4_5989 and Pf1N1B4_5990 are separated by 177 nucleotides
Pf1N1B4_5987 - FIG067310: hypothetical protein, at 439,298 to 440,068
_5987
Pf1N1B4_5988 - FIG067310: hypothetical protein, at 440,065 to 440,580
_5988
Pf1N1B4_5989 - FIG067310: hypothetical protein, at 440,553 to 441,260
_5989
Pf1N1B4_5990 - FIG00998616: hypothetical protein, at 441,438 to 442,103
_5990
Position (kb) 440
441
442 Strain fitness (log2 ratio) -2
-1
0
1
2 at 439.566 kb on + strand, within Pf1N1B4_5987 at 439.566 kb on + strand, within Pf1N1B4_5987 at 439.566 kb on + strand, within Pf1N1B4_5987 at 439.566 kb on + strand, within Pf1N1B4_5987 at 439.566 kb on + strand, within Pf1N1B4_5987 at 439.567 kb on - strand, within Pf1N1B4_5987 at 439.567 kb on - strand at 439.737 kb on + strand, within Pf1N1B4_5987 at 439.737 kb on + strand, within Pf1N1B4_5987 at 439.737 kb on + strand, within Pf1N1B4_5987 at 439.798 kb on - strand, within Pf1N1B4_5987 at 439.800 kb on + strand, within Pf1N1B4_5987 at 439.800 kb on + strand, within Pf1N1B4_5987 at 439.801 kb on - strand, within Pf1N1B4_5987 at 439.996 kb on + strand at 440.120 kb on + strand, within Pf1N1B4_5988 at 440.273 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.492 kb on + strand, within Pf1N1B4_5988 at 440.493 kb on - strand, within Pf1N1B4_5988 at 440.537 kb on + strand at 440.770 kb on + strand, within Pf1N1B4_5989 at 440.770 kb on + strand, within Pf1N1B4_5989 at 440.770 kb on + strand, within Pf1N1B4_5989 at 440.812 kb on + strand, within Pf1N1B4_5989 at 440.812 kb on + strand, within Pf1N1B4_5989 at 440.813 kb on - strand, within Pf1N1B4_5989 at 440.816 kb on - strand, within Pf1N1B4_5989 at 440.828 kb on - strand, within Pf1N1B4_5989 at 441.016 kb on + strand, within Pf1N1B4_5989 at 441.016 kb on + strand, within Pf1N1B4_5989 at 441.085 kb on + strand, within Pf1N1B4_5989 at 441.269 kb on - strand at 441.296 kb on + strand at 441.296 kb on + strand at 441.297 kb on - strand at 441.332 kb on + strand at 441.406 kb on + strand at 441.439 kb on + strand at 442.201 kb on + strand at 442.201 kb on + strand at 442.201 kb on + strand at 442.201 kb on + strand at 442.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 439,566 + Pf1N1B4_5987 0.35 -0.3 439,566 + Pf1N1B4_5987 0.35 -0.3 439,566 + Pf1N1B4_5987 0.35 +0.9 439,566 + Pf1N1B4_5987 0.35 +0.5 439,566 + Pf1N1B4_5987 0.35 -0.6 439,567 - Pf1N1B4_5987 0.35 +0.3 439,567 - +1.7 439,737 + Pf1N1B4_5987 0.57 -0.3 439,737 + Pf1N1B4_5987 0.57 +2.5 439,737 + Pf1N1B4_5987 0.57 -0.0 439,798 - Pf1N1B4_5987 0.65 -1.7 439,800 + Pf1N1B4_5987 0.65 +1.3 439,800 + Pf1N1B4_5987 0.65 +0.7 439,801 - Pf1N1B4_5987 0.65 -0.3 439,996 + +0.2 440,120 + Pf1N1B4_5988 0.11 +0.3 440,273 + Pf1N1B4_5988 0.40 -0.3 440,492 + Pf1N1B4_5988 0.83 -1.3 440,492 + Pf1N1B4_5988 0.83 -0.3 440,492 + Pf1N1B4_5988 0.83 +0.7 440,492 + Pf1N1B4_5988 0.83 +1.8 440,492 + Pf1N1B4_5988 0.83 -0.1 440,492 + Pf1N1B4_5988 0.83 +0.7 440,492 + Pf1N1B4_5988 0.83 +2.0 440,492 + Pf1N1B4_5988 0.83 +0.3 440,492 + Pf1N1B4_5988 0.83 +0.3 440,492 + Pf1N1B4_5988 0.83 -0.3 440,493 - Pf1N1B4_5988 0.83 +1.5 440,537 + +0.4 440,770 + Pf1N1B4_5989 0.31 +2.6 440,770 + Pf1N1B4_5989 0.31 +0.7 440,770 + Pf1N1B4_5989 0.31 -1.0 440,812 + Pf1N1B4_5989 0.37 -1.9 440,812 + Pf1N1B4_5989 0.37 +0.7 440,813 - Pf1N1B4_5989 0.37 -0.9 440,816 - Pf1N1B4_5989 0.37 -0.3 440,828 - Pf1N1B4_5989 0.39 -0.6 441,016 + Pf1N1B4_5989 0.65 -0.0 441,016 + Pf1N1B4_5989 0.65 -1.2 441,085 + Pf1N1B4_5989 0.75 -1.9 441,269 - +0.2 441,296 + +0.2 441,296 + -0.7 441,297 - +0.7 441,332 + +0.4 441,406 + +0.7 441,439 + -0.3 442,201 + -1.9 442,201 + +1.5 442,201 + -0.6 442,201 + -0.7 442,202 - -0.8
Or see this region's nucleotide sequence