Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5683 and Pf1N1B4_5684 are separated by 209 nucleotides Pf1N1B4_5684 and Pf1N1B4_5685 are separated by 7 nucleotides Pf1N1B4_5685 and Pf1N1B4_5686 are separated by 2 nucleotides
Pf1N1B4_5683 - Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup, at 122,614 to 123,501
_5683
Pf1N1B4_5684 - Glyceraldehyde-3-phosphate dehydrogenase, putative, at 123,711 to 125,336
_5684
Pf1N1B4_5685 - Permease of the drug/metabolite transporter (DMT) superfamily, at 125,344 to 125,835
_5685
Pf1N1B4_5686 - Permease of the drug/metabolite transporter (DMT) superfamily, at 125,838 to 126,239
_5686
Position (kb) 123
124
125
126 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 123.362 kb on - strand, within Pf1N1B4_5683 at 123.444 kb on + strand at 123.444 kb on + strand at 123.445 kb on - strand at 123.445 kb on - strand at 123.445 kb on - strand at 123.445 kb on - strand at 123.494 kb on + strand at 123.495 kb on - strand at 123.547 kb on + strand at 123.666 kb on - strand at 123.771 kb on + strand at 123.772 kb on - strand at 123.804 kb on + strand at 123.805 kb on - strand at 123.867 kb on + strand at 123.868 kb on - strand at 124.269 kb on + strand, within Pf1N1B4_5684 at 124.424 kb on + strand, within Pf1N1B4_5684 at 124.425 kb on - strand, within Pf1N1B4_5684 at 124.428 kb on + strand, within Pf1N1B4_5684 at 124.429 kb on - strand, within Pf1N1B4_5684 at 124.429 kb on - strand, within Pf1N1B4_5684 at 125.016 kb on + strand, within Pf1N1B4_5684 at 125.017 kb on - strand, within Pf1N1B4_5684 at 125.158 kb on - strand, within Pf1N1B4_5684 at 125.326 kb on - strand at 125.558 kb on + strand, within Pf1N1B4_5685 at 125.558 kb on + strand, within Pf1N1B4_5685 at 125.558 kb on + strand, within Pf1N1B4_5685 at 125.558 kb on + strand at 125.558 kb on + strand, within Pf1N1B4_5685 at 125.559 kb on - strand at 125.559 kb on - strand, within Pf1N1B4_5685 at 125.559 kb on - strand at 125.559 kb on - strand, within Pf1N1B4_5685 at 125.784 kb on - strand, within Pf1N1B4_5685 at 125.935 kb on + strand, within Pf1N1B4_5686 at 125.936 kb on - strand, within Pf1N1B4_5686 at 126.222 kb on + strand at 126.223 kb on - strand at 126.250 kb on + strand at 126.251 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 123,362 - Pf1N1B4_5683 0.84 -0.4 123,444 + -1.4 123,444 + -0.2 123,445 - -3.0 123,445 - -1.0 123,445 - -0.4 123,445 - +0.6 123,494 + +1.2 123,495 - -2.0 123,547 + -0.0 123,666 - +0.6 123,771 + +1.2 123,772 - +0.2 123,804 + -0.3 123,805 - -2.4 123,867 + +0.2 123,868 - +0.2 124,269 + Pf1N1B4_5684 0.34 -1.0 124,424 + Pf1N1B4_5684 0.44 -1.6 124,425 - Pf1N1B4_5684 0.44 -1.4 124,428 + Pf1N1B4_5684 0.44 -1.4 124,429 - Pf1N1B4_5684 0.44 -0.8 124,429 - Pf1N1B4_5684 0.44 +1.0 125,016 + Pf1N1B4_5684 0.80 -0.6 125,017 - Pf1N1B4_5684 0.80 +0.9 125,158 - Pf1N1B4_5684 0.89 -0.4 125,326 - -0.4 125,558 + Pf1N1B4_5685 0.43 -0.1 125,558 + Pf1N1B4_5685 0.43 -0.0 125,558 + Pf1N1B4_5685 0.43 -1.4 125,558 + -1.4 125,558 + Pf1N1B4_5685 0.43 +2.6 125,559 - -0.4 125,559 - Pf1N1B4_5685 0.44 +0.1 125,559 - +1.2 125,559 - Pf1N1B4_5685 0.44 +1.2 125,784 - Pf1N1B4_5685 0.89 -0.1 125,935 + Pf1N1B4_5686 0.24 -0.9 125,936 - Pf1N1B4_5686 0.24 +0.0 126,222 + -1.0 126,223 - +2.3 126,250 + -2.0 126,251 - +1.6
Or see this region's nucleotide sequence