Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4997 and Pf1N1B4_4998 are separated by 340 nucleotides Pf1N1B4_4998 and Pf1N1B4_4999 are separated by 275 nucleotides
Pf1N1B4_4997 - Methyl-accepting chemotaxis protein, at 5,544,639 to 5,546,264
_4997
Pf1N1B4_4998 - Glycerate kinase (EC 2.7.1.31), at 5,546,605 to 5,547,747
_4998
Pf1N1B4_4999 - Sugar diacid utilization regulator SdaR, at 5,548,023 to 5,549,153
_4999
Position (kb)
5546
5547
5548 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5545.887 kb on + strand, within Pf1N1B4_4997 at 5545.888 kb on - strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.891 kb on + strand at 5545.891 kb on + strand, within Pf1N1B4_4997 at 5545.892 kb on - strand, within Pf1N1B4_4997 at 5545.892 kb on - strand, within Pf1N1B4_4997 at 5546.049 kb on + strand, within Pf1N1B4_4997 at 5546.208 kb on + strand at 5546.252 kb on + strand at 5546.253 kb on - strand at 5546.264 kb on + strand at 5546.264 kb on + strand at 5546.264 kb on + strand at 5546.264 kb on + strand at 5546.264 kb on + strand at 5546.265 kb on - strand at 5546.265 kb on - strand at 5546.333 kb on + strand at 5546.359 kb on + strand at 5546.359 kb on + strand at 5546.359 kb on + strand at 5546.359 kb on + strand at 5546.360 kb on - strand at 5546.382 kb on - strand at 5546.382 kb on - strand at 5546.382 kb on - strand at 5546.427 kb on + strand at 5546.427 kb on + strand at 5546.477 kb on + strand at 5547.798 kb on - strand at 5547.832 kb on + strand at 5547.833 kb on - strand at 5548.470 kb on - strand, within Pf1N1B4_4999
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,545,887 + Pf1N1B4_4997 0.77 +1.9 5,545,888 - Pf1N1B4_4997 0.77 -1.1 5,545,891 + Pf1N1B4_4997 0.77 +0.2 5,545,891 + Pf1N1B4_4997 0.77 -0.2 5,545,891 + Pf1N1B4_4997 0.77 -0.5 5,545,891 + Pf1N1B4_4997 0.77 +1.1 5,545,891 + Pf1N1B4_4997 0.77 +1.2 5,545,891 + Pf1N1B4_4997 0.77 +1.8 5,545,891 + Pf1N1B4_4997 0.77 +0.5 5,545,891 + -0.5 5,545,891 + Pf1N1B4_4997 0.77 +1.8 5,545,892 - Pf1N1B4_4997 0.77 +0.7 5,545,892 - Pf1N1B4_4997 0.77 -1.3 5,546,049 + Pf1N1B4_4997 0.87 +0.9 5,546,208 + -1.9 5,546,252 + +2.5 5,546,253 - -0.2 5,546,264 + +0.5 5,546,264 + +2.6 5,546,264 + +2.1 5,546,264 + +0.1 5,546,264 + -0.5 5,546,265 - -1.5 5,546,265 - +1.6 5,546,333 + +0.5 5,546,359 + -1.5 5,546,359 + +2.9 5,546,359 + -0.2 5,546,359 + -2.5 5,546,360 - +0.8 5,546,382 - -0.5 5,546,382 - -0.1 5,546,382 - +2.1 5,546,427 + +1.1 5,546,427 + -0.5 5,546,477 + +2.3 5,547,798 - +0.5 5,547,832 + -0.9 5,547,833 - -0.8 5,548,470 - Pf1N1B4_4999 0.40 +2.5
Or see this region's nucleotide sequence