Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4968 and Pf1N1B4_4969 are separated by 214 nucleotides Pf1N1B4_4969 and Pf1N1B4_4970 are separated by 581 nucleotides
Pf1N1B4_4968 - 4-carboxymuconolactone decarboxylase (EC 4.1.1.44), at 5,509,259 to 5,510,083
_4968
Pf1N1B4_4969 - FIG00956189: hypothetical protein, at 5,510,298 to 5,510,729
_4969
Pf1N1B4_4970 - hypothetical protein, at 5,511,311 to 5,511,718
_4970
Position (kb)
5510
5511 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5509.336 kb on - strand at 5509.336 kb on - strand at 5509.336 kb on - strand at 5509.527 kb on + strand, within Pf1N1B4_4968 at 5509.528 kb on - strand, within Pf1N1B4_4968 at 5509.547 kb on + strand, within Pf1N1B4_4968 at 5509.668 kb on - strand, within Pf1N1B4_4968 at 5509.668 kb on - strand, within Pf1N1B4_4968 at 5509.717 kb on - strand, within Pf1N1B4_4968 at 5509.717 kb on - strand, within Pf1N1B4_4968 at 5509.907 kb on - strand, within Pf1N1B4_4968 at 5509.908 kb on + strand at 5510.092 kb on + strand at 5510.092 kb on + strand at 5510.092 kb on + strand at 5510.095 kb on + strand at 5510.096 kb on - strand at 5510.096 kb on - strand at 5510.096 kb on - strand at 5510.108 kb on + strand at 5510.127 kb on - strand at 5510.285 kb on + strand at 5510.285 kb on + strand at 5510.286 kb on - strand at 5510.558 kb on - strand, within Pf1N1B4_4969 at 5510.562 kb on - strand, within Pf1N1B4_4969 at 5510.562 kb on - strand, within Pf1N1B4_4969 at 5510.681 kb on - strand, within Pf1N1B4_4969 at 5510.957 kb on + strand at 5511.058 kb on + strand at 5511.083 kb on - strand at 5511.083 kb on - strand at 5511.156 kb on + strand at 5511.156 kb on + strand at 5511.301 kb on + strand at 5511.301 kb on + strand at 5511.302 kb on - strand at 5511.321 kb on - strand at 5511.321 kb on - strand at 5511.579 kb on - strand, within Pf1N1B4_4970
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,509,336 - -0.5 5,509,336 - -0.1 5,509,336 - +0.3 5,509,527 + Pf1N1B4_4968 0.32 -1.5 5,509,528 - Pf1N1B4_4968 0.33 +1.3 5,509,547 + Pf1N1B4_4968 0.35 +0.8 5,509,668 - Pf1N1B4_4968 0.50 +0.2 5,509,668 - Pf1N1B4_4968 0.50 +1.0 5,509,717 - Pf1N1B4_4968 0.56 -0.5 5,509,717 - Pf1N1B4_4968 0.56 +0.5 5,509,907 - Pf1N1B4_4968 0.79 -2.5 5,509,908 + +0.0 5,510,092 + +0.1 5,510,092 + +0.7 5,510,092 + +0.5 5,510,095 + -1.0 5,510,096 - +1.8 5,510,096 - +0.0 5,510,096 - -3.3 5,510,108 + +1.6 5,510,127 - +0.5 5,510,285 + -0.5 5,510,285 + -1.0 5,510,286 - -0.5 5,510,558 - Pf1N1B4_4969 0.60 -0.8 5,510,562 - Pf1N1B4_4969 0.61 -1.0 5,510,562 - Pf1N1B4_4969 0.61 -0.5 5,510,681 - Pf1N1B4_4969 0.89 -0.1 5,510,957 + -0.5 5,511,058 + +1.0 5,511,083 - -2.3 5,511,083 - -0.5 5,511,156 + -0.3 5,511,156 + +0.5 5,511,301 + -0.5 5,511,301 + +0.9 5,511,302 - +1.0 5,511,321 - -1.0 5,511,321 - +0.5 5,511,579 - Pf1N1B4_4970 0.66 -1.5
Or see this region's nucleotide sequence