Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2034 and Pf1N1B4_2035 are separated by 234 nucleotides Pf1N1B4_2035 and Pf1N1B4_2036 are separated by 15 nucleotides
Pf1N1B4_2034 - Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1), at 2,320,811 to 2,321,809
_2034
Pf1N1B4_2035 - Phosphate transport system permease protein PstC (TC 3.A.1.7.1), at 2,322,044 to 2,324,332
_2035
Pf1N1B4_2036 - Phosphate transport system permease protein PstA (TC 3.A.1.7.1), at 2,324,348 to 2,326,018
_2036
Position (kb)
2322
2323
2324
2325 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2321.726 kb on + strand at 2321.726 kb on + strand at 2321.727 kb on - strand at 2321.796 kb on + strand at 2321.796 kb on + strand at 2321.796 kb on + strand at 2321.796 kb on + strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.799 kb on + strand at 2321.799 kb on + strand at 2321.799 kb on + strand at 2321.799 kb on + strand at 2321.815 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.898 kb on - strand at 2321.898 kb on - strand at 2321.898 kb on - strand at 2321.898 kb on - strand at 2321.929 kb on - strand at 2322.027 kb on + strand at 2322.027 kb on + strand at 2322.110 kb on - strand at 2322.590 kb on + strand, within Pf1N1B4_2035 at 2322.839 kb on + strand, within Pf1N1B4_2035 at 2323.343 kb on + strand, within Pf1N1B4_2035 at 2323.344 kb on - strand, within Pf1N1B4_2035 at 2323.358 kb on + strand, within Pf1N1B4_2035 at 2323.358 kb on + strand, within Pf1N1B4_2035 at 2323.448 kb on + strand, within Pf1N1B4_2035 at 2323.502 kb on + strand, within Pf1N1B4_2035 at 2323.503 kb on - strand, within Pf1N1B4_2035 at 2323.610 kb on + strand, within Pf1N1B4_2035 at 2323.787 kb on + strand, within Pf1N1B4_2035 at 2323.787 kb on + strand, within Pf1N1B4_2035 at 2323.799 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.866 kb on - strand, within Pf1N1B4_2035 at 2323.928 kb on + strand, within Pf1N1B4_2035 at 2323.929 kb on - strand, within Pf1N1B4_2035 at 2323.929 kb on - strand, within Pf1N1B4_2035 at 2324.318 kb on + strand at 2324.330 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2325.194 kb on + strand, within Pf1N1B4_2036 at 2325.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,321,726 + -0.1 2,321,726 + -1.5 2,321,727 - +0.5 2,321,796 + +0.5 2,321,796 + +2.1 2,321,796 + +2.8 2,321,796 + -1.4 2,321,797 - +0.8 2,321,797 - +1.5 2,321,797 - +0.1 2,321,797 - +0.5 2,321,797 - +0.2 2,321,797 - -2.1 2,321,797 - -1.0 2,321,797 - +1.5 2,321,799 + +0.9 2,321,799 + +2.1 2,321,799 + -0.1 2,321,799 + +1.1 2,321,815 + -0.7 2,321,897 + +1.5 2,321,897 + -1.5 2,321,897 + +1.2 2,321,897 + +0.9 2,321,897 + +1.6 2,321,898 - -0.8 2,321,898 - +0.1 2,321,898 - +0.3 2,321,898 - +0.5 2,321,929 - -0.3 2,322,027 + +0.8 2,322,027 + +1.8 2,322,110 - -0.9 2,322,590 + Pf1N1B4_2035 0.24 +0.3 2,322,839 + Pf1N1B4_2035 0.35 -1.5 2,323,343 + Pf1N1B4_2035 0.57 -1.1 2,323,344 - Pf1N1B4_2035 0.57 -0.9 2,323,358 + Pf1N1B4_2035 0.57 +0.5 2,323,358 + Pf1N1B4_2035 0.57 -1.1 2,323,448 + Pf1N1B4_2035 0.61 +0.7 2,323,502 + Pf1N1B4_2035 0.64 +0.2 2,323,503 - Pf1N1B4_2035 0.64 -0.1 2,323,610 + Pf1N1B4_2035 0.68 -0.1 2,323,787 + Pf1N1B4_2035 0.76 -0.4 2,323,787 + Pf1N1B4_2035 0.76 +0.7 2,323,799 + Pf1N1B4_2035 0.77 -2.1 2,323,865 + Pf1N1B4_2035 0.80 -0.1 2,323,865 + Pf1N1B4_2035 0.80 -0.1 2,323,865 + Pf1N1B4_2035 0.80 -0.5 2,323,865 + Pf1N1B4_2035 0.80 -0.3 2,323,866 - Pf1N1B4_2035 0.80 +0.5 2,323,928 + Pf1N1B4_2035 0.82 -2.5 2,323,929 - Pf1N1B4_2035 0.82 -0.5 2,323,929 - Pf1N1B4_2035 0.82 +3.1 2,324,318 + +1.1 2,324,330 + -0.5 2,324,339 + +0.1 2,324,339 + +0.5 2,324,339 + +2.5 2,324,339 + -0.9 2,324,339 + +0.3 2,324,339 + -0.1 2,325,194 + Pf1N1B4_2036 0.51 +0.5 2,325,195 - -0.1
Or see this region's nucleotide sequence