Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS18130

Experiment: R2A with m-arsenite 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with m-arsenite 0.078125 mM
3,954,736	+		LRK54_RS18125	0.56	+0.2
3,954,737	-		LRK54_RS18125	0.56	-0.3
3,954,737	-		LRK54_RS18125	0.56	-0.5
3,954,737	-		LRK54_RS18125	0.56	-1.2
3,954,737	-		LRK54_RS18125	0.56	-1.4
3,954,940	+		LRK54_RS18125	0.69	-0.3
3,954,940	+		LRK54_RS18125	0.69	+0.5
3,954,940	+		LRK54_RS18125	0.69	-0.7
3,954,940	+		LRK54_RS18125	0.69	+0.6
3,954,940	+		LRK54_RS18125	0.69	-1.4
3,954,940	+		LRK54_RS18125	0.69	-0.3
3,954,940	+		LRK54_RS18125	0.69	-0.3
3,954,940	+		LRK54_RS18125	0.69	+4.2
3,954,940	+		LRK54_RS18125	0.69	+0.7
3,954,940	+		LRK54_RS18125	0.69	+2.5
3,954,940	+		LRK54_RS18125	0.69	+0.6
3,954,940	+		LRK54_RS18125	0.69	+1.6
3,954,940	+		LRK54_RS18125	0.69	-0.7
3,954,940	+		LRK54_RS18125	0.69	-0.6
3,954,940	+		LRK54_RS18125	0.69	+2.0
3,954,940	+		LRK54_RS18125	0.69	-0.6
3,954,940	+		LRK54_RS18125	0.69	+0.6
3,954,940	+		LRK54_RS18125	0.69	+0.3
3,954,940	+		LRK54_RS18125	0.69	-0.8
3,954,940	+		LRK54_RS18125	0.69	+0.6
3,954,940	+		LRK54_RS18125	0.69	+0.8
3,954,940	+		LRK54_RS18125	0.69	-0.1
3,954,940	+		LRK54_RS18125	0.69	+3.1
3,954,940	+		LRK54_RS18125	0.69	-0.7
3,954,940	+		LRK54_RS18125	0.69	+0.0
3,954,940	+		LRK54_RS18125	0.69	+1.8
3,954,940	+		LRK54_RS18125	0.69	+1.5
3,954,940	+		LRK54_RS18125	0.69	+0.2
3,954,940	+		LRK54_RS18125	0.69	-0.6
3,954,941	-		LRK54_RS18125	0.69	-1.0
3,954,941	-		LRK54_RS18125	0.69	+1.0
3,954,941	-		LRK54_RS18125	0.69	-1.1
3,954,941	-		LRK54_RS18125	0.69	+0.7
3,954,941	-		LRK54_RS18125	0.69	-1.2
3,954,941	-		LRK54_RS18125	0.69	-0.1
3,954,941	-		LRK54_RS18125	0.69	+0.5
3,954,941	-		LRK54_RS18125	0.69	+0.1
3,954,941	-		LRK54_RS18125	0.69	+2.3
3,954,941	-		LRK54_RS18125	0.69	-0.6
3,954,941	-		LRK54_RS18125	0.69	-0.2
3,954,941	-		LRK54_RS18125	0.69	+0.1
3,954,941	-		LRK54_RS18125	0.69	-0.1
3,954,941	-		LRK54_RS18125	0.69	-0.1
3,954,941	-		LRK54_RS18125	0.69	-1.2
3,954,941	-		LRK54_RS18125	0.69	+0.5
3,954,941	-		LRK54_RS18125	0.69	+0.3
3,954,941	-		LRK54_RS18125	0.69	-0.8
3,954,941	-		LRK54_RS18125	0.69	-1.7
3,954,941	-		LRK54_RS18125	0.69	+1.0
3,954,941	-		LRK54_RS18125	0.69	-0.6
3,954,941	-		LRK54_RS18125	0.69	-0.9
3,954,941	-		LRK54_RS18125	0.69	+0.5
3,954,941	-		LRK54_RS18125	0.69	+0.0
3,954,941	-		LRK54_RS18125	0.69	-1.5
3,954,941	-		LRK54_RS18125	0.69	-0.5
3,954,941	-		LRK54_RS18125	0.69	-1.2
3,954,941	-		LRK54_RS18125	0.69	-0.2
3,954,941	-		LRK54_RS18125	0.69	+0.1
3,954,941	-		LRK54_RS18125	0.69	+0.2
3,954,941	-		LRK54_RS18125	0.69	-1.7
3,954,941	-		LRK54_RS18125	0.69	+0.1
3,954,941	-		LRK54_RS18125	0.69	-0.1
3,954,941	-		LRK54_RS18125	0.69	+1.0
3,954,941	-		LRK54_RS18125	0.69	-0.8
3,954,941	-		LRK54_RS18125	0.69	-2.0
3,954,941	-		LRK54_RS18125	0.69	-0.9
3,954,941	-		LRK54_RS18125	0.69	+0.6
3,954,976	+		LRK54_RS18125	0.71	+0.2
3,954,976	+		LRK54_RS18125	0.71	-0.6
3,954,976	+		LRK54_RS18125	0.71	+0.2
3,954,976	+		LRK54_RS18125	0.71	+0.4
3,954,976	+		LRK54_RS18125	0.71	+0.8
3,954,976	+		LRK54_RS18125	0.71	-0.5
3,954,977	-		LRK54_RS18125	0.71	+1.2
3,954,977	-		LRK54_RS18125	0.71	-0.2
3,954,977	-		LRK54_RS18125	0.71	+0.8
3,954,977	-		LRK54_RS18125	0.71	+0.0
3,954,977	-		LRK54_RS18125	0.71	-0.8
3,954,977	-		LRK54_RS18125	0.71	-0.8
3,954,977	-		LRK54_RS18125	0.71	+0.1
3,954,977	-		LRK54_RS18125	0.71	-0.5
3,954,977	-		LRK54_RS18125	0.71	+0.5
3,954,977	-		LRK54_RS18125	0.71	+0.6
3,954,977	-		LRK54_RS18125	0.71	-0.2
3,954,977	-		LRK54_RS18125	0.71	+1.2
3,954,977	-		LRK54_RS18125	0.71	+2.6
3,954,997	+		LRK54_RS18125	0.73	+0.3
3,954,998	-		LRK54_RS18125	0.73	+1.4
3,954,998	-		LRK54_RS18125	0.73	+0.8
3,954,998	-		LRK54_RS18125	0.73	+1.8
3,954,998	-		LRK54_RS18125	0.73	+0.8
3,954,998	-		LRK54_RS18125	0.73	+0.9
3,954,998	-		LRK54_RS18125	0.73	+0.5
3,954,998	-		LRK54_RS18125	0.73	+0.2
3,954,998	-		LRK54_RS18125	0.73	+1.3
3,955,013	+		LRK54_RS18125	0.74	+1.5
3,955,015	+		LRK54_RS18125	0.74	-0.2
3,955,015	+		LRK54_RS18125	0.74	+0.8
3,955,015	+		LRK54_RS18125	0.74	-0.5
3,955,015	+		LRK54_RS18125	0.74	+0.5
3,955,015	+		LRK54_RS18125	0.74	+0.1
3,955,015	+		LRK54_RS18125	0.74	-1.7
3,955,015	+		LRK54_RS18125	0.74	-1.2
3,955,015	+		LRK54_RS18125	0.74	-0.2
3,955,015	+		LRK54_RS18125	0.74	+0.4
3,955,015	+		LRK54_RS18125	0.74	-0.7
3,955,015	+		LRK54_RS18125	0.74	+0.4
3,955,015	+		LRK54_RS18125	0.74	+0.6
3,955,015	+		LRK54_RS18125	0.74	+0.2
3,955,015	+		LRK54_RS18125	0.74	-0.6
3,955,015	+		LRK54_RS18125	0.74	-1.8
3,955,015	+		LRK54_RS18125	0.74	+0.1
3,955,015	+		LRK54_RS18125	0.74	-0.0
3,955,015	+		LRK54_RS18125	0.74	-0.9
3,955,015	+		LRK54_RS18125	0.74	-0.5
3,955,015	+		LRK54_RS18125	0.74	-0.4
3,955,015	+		LRK54_RS18125	0.74	-0.2
3,955,015	+		LRK54_RS18125	0.74	+1.1
3,955,015	+		LRK54_RS18125	0.74	-0.2
3,955,015	+		LRK54_RS18125	0.74	+0.5
3,955,015	+		LRK54_RS18125	0.74	+0.2
3,955,015	+		LRK54_RS18125	0.74	+0.2
3,955,015	+		LRK54_RS18125	0.74	-2.5
3,955,015	+		LRK54_RS18125	0.74	-0.9
3,955,015	+		LRK54_RS18125	0.74	-0.4
3,955,015	+		LRK54_RS18125	0.74	-0.7
3,955,015	+		LRK54_RS18125	0.74	-2.5
3,955,015	+		LRK54_RS18125	0.74	-0.5
3,955,015	+		LRK54_RS18125	0.74	+0.1
3,955,015	+		LRK54_RS18125	0.74	+0.5
3,955,016	-		LRK54_RS18125	0.74	-1.5
3,955,016	-		LRK54_RS18125	0.74	-1.6
3,955,016	-		LRK54_RS18125	0.74	+0.8
3,955,016	-		LRK54_RS18125	0.74	-2.2
3,955,016	-		LRK54_RS18125	0.74	+0.1
3,955,016	-		LRK54_RS18125	0.74	+0.7
3,955,016	-		LRK54_RS18125	0.74	-0.1
3,955,016	-		LRK54_RS18125	0.74	-1.2
3,955,016	-		LRK54_RS18125	0.74	-2.0
3,955,016	-		LRK54_RS18125	0.74	+1.1
3,955,016	-		LRK54_RS18125	0.74	+1.4
3,955,016	-		LRK54_RS18125	0.74	-0.2
3,955,016	-		LRK54_RS18125	0.74	-0.0
3,955,016	-		LRK54_RS18125	0.74	+0.4
3,955,016	-		LRK54_RS18125	0.74	+0.0
3,955,016	-		LRK54_RS18125	0.74	-1.3
3,955,016	-		LRK54_RS18125	0.74	+0.3
3,955,016	-		LRK54_RS18125	0.74	-0.2
3,955,016	-		LRK54_RS18125	0.74	-0.1
3,955,016	-		LRK54_RS18125	0.74	+0.3
3,955,016	-		LRK54_RS18125	0.74	+0.8
3,955,016	-		LRK54_RS18125	0.74	-0.4
3,955,016	-		LRK54_RS18125	0.74	+1.2
3,955,016	-		LRK54_RS18125	0.74	-0.7
3,955,016	-		LRK54_RS18125	0.74	+1.0
3,955,016	-		LRK54_RS18125	0.74	+0.3
3,955,016	-		LRK54_RS18125	0.74	+0.9
3,955,016	-		LRK54_RS18125	0.74	-1.5
3,955,016	-		LRK54_RS18125	0.74	+0.0
3,955,016	-		LRK54_RS18125	0.74	+0.4
3,955,016	-		LRK54_RS18125	0.74	-0.4
3,955,252	+		LRK54_RS18125	0.89	-0.4
3,955,252	+		LRK54_RS18125	0.89	-1.0
3,955,252	+		LRK54_RS18125	0.89	-1.2
3,955,252	+		LRK54_RS18125	0.89	-0.6
3,955,252	+		LRK54_RS18125	0.89	+1.8
3,955,252	+		LRK54_RS18125	0.89	+1.6
3,955,252	+		LRK54_RS18125	0.89	+0.9
3,955,252	+		LRK54_RS18125	0.89	+0.8
3,955,252	+		LRK54_RS18125	0.89	+1.9
3,955,252	+		LRK54_RS18125	0.89	+0.8
3,955,253	-		LRK54_RS18125	0.89	-1.5
3,955,253	-		LRK54_RS18125	0.89	-1.1
3,955,253	-		LRK54_RS18125	0.89	-1.0
3,955,253	-		LRK54_RS18125	0.89	+0.6
3,955,253	-		LRK54_RS18125	0.89	-0.5
3,955,253	-		LRK54_RS18125	0.89	-0.4
3,955,253	-		LRK54_RS18125	0.89	-0.7
3,955,253	-		LRK54_RS18125	0.89	+0.2
3,955,253	-		LRK54_RS18125	0.89	-0.1
3,955,253	-		LRK54_RS18125	0.89	+0.8
3,955,253	-		LRK54_RS18125	0.89	-0.3
3,955,253	-		LRK54_RS18125	0.89	-0.2
3,955,253	-		LRK54_RS18125	0.89	-1.8
3,955,253	-		LRK54_RS18125	0.89	+0.1
3,955,253	-		LRK54_RS18125	0.89	+0.5
3,955,253	-		LRK54_RS18125	0.89	+1.0
3,955,253	-		LRK54_RS18125	0.89	-0.2
3,955,253	-		LRK54_RS18125	0.89	+0.2
3,955,436	+				+0.4
3,955,436	+				-1.5
3,955,436	+				+0.1
3,955,436	+				-2.1
3,955,436	+				-0.1
3,955,436	+				-1.0
3,955,437	-				+1.0
3,955,437	-				+1.4
3,955,437	-				-0.7
3,955,437	-				-0.9
3,955,564	+				-0.4
3,955,564	+				+0.9
3,955,564	+				+0.8
3,955,564	+				-2.8
3,955,564	+				-0.4
3,955,565	-				-0.5
3,955,565	-				+0.5
3,955,565	-				-0.9
3,955,646	+				+0.7
3,955,817	+		LRK54_RS18130	0.15	-0.1
3,955,817	+		LRK54_RS18130	0.15	+0.3
3,955,817	+		LRK54_RS18130	0.15	-0.4
3,955,817	+		LRK54_RS18130	0.15	-0.4
3,955,818	-		LRK54_RS18130	0.15	-0.5
3,955,818	-		LRK54_RS18130	0.15	+0.1
3,955,932	+		LRK54_RS18130	0.25	+0.5
3,955,932	+		LRK54_RS18130	0.25	-0.2
3,955,932	+		LRK54_RS18130	0.25	+0.2
3,955,932	+		LRK54_RS18130	0.25	+0.0
3,955,932	+		LRK54_RS18130	0.25	-0.1
3,955,932	+		LRK54_RS18130	0.25	+0.9
3,955,932	+		LRK54_RS18130	0.25	-0.2
3,955,932	+		LRK54_RS18130	0.25	-0.1
3,955,932	+		LRK54_RS18130	0.25	-0.9
3,955,932	+		LRK54_RS18130	0.25	-0.0
3,955,932	+		LRK54_RS18130	0.25	-0.3
3,955,933	-		LRK54_RS18130	0.25	-1.1
3,955,933	-		LRK54_RS18130	0.25	+2.6
3,955,933	-		LRK54_RS18130	0.25	-1.0
3,955,933	-		LRK54_RS18130	0.25	-1.6
3,955,933	-		LRK54_RS18130	0.25	-0.5
3,956,061	+		LRK54_RS18130	0.36	-0.7
3,956,061	+		LRK54_RS18130	0.36	-0.4
3,956,061	+		LRK54_RS18130	0.36	-0.0
3,956,061	+		LRK54_RS18130	0.36	+0.8
3,956,062	-		LRK54_RS18130	0.36	-0.5
3,956,062	-		LRK54_RS18130	0.36	-1.6
3,956,139	+		LRK54_RS18130	0.43	+2.4
3,956,140	-		LRK54_RS18130	0.43	+0.7
3,956,140	-		LRK54_RS18130	0.43	-0.1
3,956,343	+		LRK54_RS18130	0.60	+0.3
3,956,343	+		LRK54_RS18130	0.60	+1.0
3,956,343	+		LRK54_RS18130	0.60	-0.1
3,956,343	+		LRK54_RS18130	0.60	+0.4
3,956,343	+		LRK54_RS18130	0.60	+0.2
3,956,343	+		LRK54_RS18130	0.60	+0.3
3,956,343	+		LRK54_RS18130	0.60	-0.1
3,956,343	+		LRK54_RS18130	0.60	+0.0
3,956,343	+		LRK54_RS18130	0.60	-0.5
3,956,343	+		LRK54_RS18130	0.60	-0.9
3,956,343	+		LRK54_RS18130	0.60	-0.2
3,956,343	+		LRK54_RS18130	0.60	+0.2
3,956,343	+		LRK54_RS18130	0.60	-0.4
3,956,343	+		LRK54_RS18130	0.60	+1.0
3,956,343	+		LRK54_RS18130	0.60	+0.6
3,956,343	+		LRK54_RS18130	0.60	+0.9
3,956,344	-		LRK54_RS18130	0.60	+0.5
3,956,344	-		LRK54_RS18130	0.60	-0.3
3,956,344	-		LRK54_RS18130	0.60	-0.2
3,956,344	-		LRK54_RS18130	0.60	-0.1
3,956,344	-		LRK54_RS18130	0.60	-0.2
3,956,344	-		LRK54_RS18130	0.60	-0.3
3,956,344	-		LRK54_RS18130	0.60	+1.0
3,956,344	-		LRK54_RS18130	0.60	-2.5
3,956,344	-		LRK54_RS18130	0.60	+0.2
3,956,344	-		LRK54_RS18130	0.60	-0.1
3,956,344	-		LRK54_RS18130	0.60	-0.6
3,956,469	+		LRK54_RS18130	0.71	+1.0
3,956,469	+		LRK54_RS18130	0.71	-0.2
3,956,469	+		LRK54_RS18130	0.71	-1.2
3,956,469	+		LRK54_RS18130	0.71	+0.4
3,956,469	+		LRK54_RS18130	0.71	-0.4
3,956,469	+		LRK54_RS18130	0.71	-0.9
3,956,469	+		LRK54_RS18130	0.71	-0.9
3,956,469	+		LRK54_RS18130	0.71	+0.4
3,956,469	+		LRK54_RS18130	0.71	-0.3
3,956,469	+		LRK54_RS18130	0.71	+0.3
3,956,469	+		LRK54_RS18130	0.71	+0.2
3,956,470	-		LRK54_RS18130	0.71	-0.2
3,956,470	-		LRK54_RS18130	0.71	-0.4
3,956,470	-		LRK54_RS18130	0.71	+0.8
3,956,470	-		LRK54_RS18130	0.71	-1.3
3,956,470	-		LRK54_RS18130	0.71	-0.5
3,956,470	-		LRK54_RS18130	0.71	-1.0
3,956,470	-		LRK54_RS18130	0.71	-0.5
3,956,470	-		LRK54_RS18130	0.71	+0.3
3,956,470	-		LRK54_RS18130	0.71	+0.0
3,956,470	-		LRK54_RS18130	0.71	+1.6
3,956,470	-		LRK54_RS18130	0.71	-0.2
3,956,470	-		LRK54_RS18130	0.71	+0.0
3,956,470	-		LRK54_RS18130	0.71	-0.5
3,956,470	-		LRK54_RS18130	0.71	-0.1
3,956,470	-		LRK54_RS18130	0.71	-0.8
3,956,470	-		LRK54_RS18130	0.71	-0.5
3,956,470	-		LRK54_RS18130	0.71	-0.5
3,956,470	-		LRK54_RS18130	0.71	-0.4
3,956,470	-		LRK54_RS18130	0.71	+2.0
3,956,470	-		LRK54_RS18130	0.71	+0.1
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