Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS15090

Experiment: R2A with m-arsenite 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with m-arsenite 0.078125 mM
3,333,621	+				-0.4
3,333,621	+				-0.9
3,333,621	+				+0.9
3,333,621	+				-1.3
3,333,621	+				-0.1
3,333,621	+				-1.0
3,333,621	+				-1.0
3,333,621	+				-1.3
3,333,621	+				-0.6
3,333,621	+				-0.6
3,333,621	+				-0.7
3,333,621	+				-0.3
3,333,621	+				+1.0
3,333,621	+				+0.1
3,333,621	+				-0.5
3,333,621	+				-0.0
3,333,621	+				+0.8
3,333,621	+				-0.4
3,333,621	+				+2.0
3,333,621	+				-0.1
3,333,622	-				+1.1
3,333,622	-				-1.9
3,333,622	-				-0.6
3,333,622	-				-1.7
3,333,622	-				-1.0
3,333,622	-				-1.8
3,333,622	-				-0.7
3,333,622	-				-1.4
3,333,622	-				-0.4
3,333,622	-				-0.4
3,333,622	-				-0.4
3,333,622	-				-2.0
3,333,622	-				-0.1
3,333,622	-				+0.0
3,333,622	-				+1.9
3,333,622	-				+0.6
3,333,622	-				+0.6
3,333,622	-				-0.4
3,333,648	+				-0.1
3,333,648	+				-0.4
3,333,648	+				-0.3
3,333,648	+				-0.6
3,333,648	+				-0.1
3,333,648	+				-0.5
3,333,648	+				+0.3
3,333,648	+				-0.5
3,333,648	+				+1.8
3,333,648	+				-0.1
3,333,648	+				-0.3
3,333,648	+				+0.5
3,333,648	+				-0.7
3,333,648	+				+0.6
3,333,648	+				+0.2
3,333,648	+				-0.7
3,333,648	+				-0.8
3,333,648	+				+0.5
3,333,648	+				-1.2
3,333,649	-				-0.6
3,333,649	-				-0.2
3,333,649	-				-1.7
3,333,649	-				-0.6
3,333,649	-				-0.5
3,333,649	-				-1.5
3,333,649	-				-0.6
3,333,649	-				+0.4
3,333,649	-				-0.9
3,333,649	-				+0.7
3,333,649	-				-0.9
3,333,649	-				+0.4
3,333,649	-				-0.4
3,333,649	-				-0.1
3,333,649	-				-0.5
3,333,649	-				+1.4
3,333,649	-				+1.1
3,333,649	-				-1.7
3,333,649	-				-1.5
3,333,649	-				-1.0
3,333,649	-				+0.3
3,333,669	+				-1.4
3,333,669	+				+1.0
3,333,669	+				-0.7
3,333,669	+				-0.9
3,333,669	+				+1.1
3,333,670	-				+1.1
3,334,594	+				+0.4
3,334,594	+				-0.3
3,334,594	+				-0.3
3,334,594	+				-0.3
3,334,594	+				-0.4
3,334,595	-				+1.4
3,334,595	-				+2.4
3,334,595	-				-1.3
3,334,595	-				+0.9
3,334,595	-				-0.4
3,334,611	+				+1.4
3,334,611	+				-0.6
3,334,611	+				-0.1
3,334,611	+				+2.4
3,334,611	+				+0.1
3,334,611	+				-0.1
3,334,611	+				-1.0
3,334,612	-				+0.1
3,334,612	-				-1.0
3,334,612	-				-0.1
3,334,612	-				+0.9
3,334,612	-				-0.4
3,334,612	-				-0.6
3,334,900	-		LRK54_RS15090	0.48	-1.4
3,334,900	-		LRK54_RS15090	0.48	-1.3
3,334,900	-		LRK54_RS15090	0.48	-0.4
3,334,918	+		LRK54_RS15090	0.51	+0.6
3,334,918	+		LRK54_RS15090	0.51	-1.6
3,334,918	+		LRK54_RS15090	0.51	-0.9
3,334,918	+		LRK54_RS15090	0.51	-0.8
3,334,974	+		LRK54_RS15090	0.61	-0.6
3,334,974	+		LRK54_RS15090	0.61	+0.1
3,334,974	+		LRK54_RS15090	0.61	-0.1
3,334,974	+		LRK54_RS15090	0.61	-1.8
3,334,974	+		LRK54_RS15090	0.61	-1.5
3,334,974	+		LRK54_RS15090	0.61	-1.1
3,334,974	+		LRK54_RS15090	0.61	-1.8
3,334,974	+		LRK54_RS15090	0.61	+0.6
3,334,974	+		LRK54_RS15090	0.61	-0.7
3,334,974	+		LRK54_RS15090	0.61	+0.1
3,334,974	+		LRK54_RS15090	0.61	-1.6
3,334,974	+		LRK54_RS15090	0.61	-1.4
3,334,974	+		LRK54_RS15090	0.61	-1.7
3,334,974	+		LRK54_RS15090	0.61	-2.0
3,334,974	+		LRK54_RS15090	0.61	+1.5
3,334,974	+		LRK54_RS15090	0.61	-1.0
3,334,974	+		LRK54_RS15090	0.61	+1.7
3,334,974	+		LRK54_RS15090	0.61	-1.6
3,334,975	-		LRK54_RS15090	0.61	-1.1
3,334,975	-		LRK54_RS15090	0.61	-2.3
3,334,975	-		LRK54_RS15090	0.61	-1.1
3,334,975	-		LRK54_RS15090	0.61	+0.4
3,334,975	-		LRK54_RS15090	0.61	-2.1
3,334,975	-		LRK54_RS15090	0.61	+2.4
3,334,975	-		LRK54_RS15090	0.61	+0.4
3,334,975	-		LRK54_RS15090	0.61	+0.3
3,334,975	-		LRK54_RS15090	0.61	-1.2
3,334,975	-		LRK54_RS15090	0.61	-0.5
3,334,975	-		LRK54_RS15090	0.61	-1.7
3,334,975	-		LRK54_RS15090	0.61	-0.7
3,334,975	-		LRK54_RS15090	0.61	-0.4
3,334,983	+		LRK54_RS15090	0.62	-0.7
3,335,134	+		LRK54_RS15090	0.88	-1.4
3,335,134	+		LRK54_RS15090	0.88	-1.8
3,335,134	+		LRK54_RS15090	0.88	-0.1
3,335,134	+		LRK54_RS15090	0.88	-1.4
3,335,135	-		LRK54_RS15090	0.88	+0.1
3,335,135	-		LRK54_RS15090	0.88	+1.4
3,335,430	+		LRK54_RS15095	0.48	+1.9
3,335,430	+		LRK54_RS15095	0.48	-2.3
3,335,430	+		LRK54_RS15095	0.48	+1.4
3,335,430	+		LRK54_RS15095	0.48	-1.0
3,335,430	+		LRK54_RS15095	0.48	-0.6
3,335,430	+		LRK54_RS15095	0.48	-1.3
3,335,430	+		LRK54_RS15095	0.48	-0.4
3,335,431	-		LRK54_RS15095	0.49	-0.6
3,335,431	-		LRK54_RS15095	0.49	+0.1
3,335,462	+		LRK54_RS15095	0.58	-1.4
3,335,462	+		LRK54_RS15095	0.58	-0.1
3,335,462	+		LRK54_RS15095	0.58	-1.3
3,335,462	+		LRK54_RS15095	0.58	+0.4
3,335,462	+		LRK54_RS15095	0.58	+0.4
3,335,463	-		LRK54_RS15095	0.59	-0.0
3,335,463	-		LRK54_RS15095	0.59	-1.4
3,335,463	-		LRK54_RS15095	0.59	-1.8
3,335,463	-		LRK54_RS15095	0.59	+0.0
3,335,463	-		LRK54_RS15095	0.59	-0.1
3,335,463	-		LRK54_RS15095	0.59	-0.4
3,335,463	-		LRK54_RS15095	0.59	+0.3
3,335,463	-		LRK54_RS15095	0.59	-1.8
3,335,463	-		LRK54_RS15095	0.59	-2.0
3,335,463	-		LRK54_RS15095	0.59	+0.4
3,335,556	+		LRK54_RS15095	0.87	-0.1
3,335,556	+		LRK54_RS15095	0.87	-0.4
3,335,556	+		LRK54_RS15095	0.87	-1.0
3,335,556	+		LRK54_RS15095	0.87	-1.5
3,335,556	+		LRK54_RS15095	0.87	+2.1
3,335,556	+		LRK54_RS15095	0.87	-0.1
3,335,556	+		LRK54_RS15095	0.87	+1.4
3,335,556	+		LRK54_RS15095	0.87	+0.1
3,335,556	+		LRK54_RS15095	0.87	-1.8
3,335,556	+		LRK54_RS15095	0.87	-1.8
3,335,556	+		LRK54_RS15095	0.87	-0.1
3,335,556	+		LRK54_RS15095	0.87	-0.6
3,335,556	+		LRK54_RS15095	0.87	+0.9
3,335,556	+		LRK54_RS15095	0.87	+0.4
3,335,556	+		LRK54_RS15095	0.87	-0.6
3,335,557	-		LRK54_RS15095	0.88	-0.5
3,335,557	-		LRK54_RS15095	0.88	+2.1
3,335,557	-		LRK54_RS15095	0.88	+0.3
3,335,557	-		LRK54_RS15095	0.88	-0.6
3,335,557	-		LRK54_RS15095	0.88	+1.0
3,335,557	-		LRK54_RS15095	0.88	-1.0
3,335,557	-		LRK54_RS15095	0.88	-0.5
3,335,557	-		LRK54_RS15095	0.88	-0.1
3,335,557	-		LRK54_RS15095	0.88	-0.4
3,335,557	-		LRK54_RS15095	0.88	-1.7
3,335,557	-		LRK54_RS15095	0.88	+0.3
3,335,557	-		LRK54_RS15095	0.88	-0.6
3,335,557	-		LRK54_RS15095	0.88	+0.9
3,335,557	-		LRK54_RS15095	0.88	-0.6
3,335,557	-		LRK54_RS15095	0.88	+0.6
3,335,557	-		LRK54_RS15095	0.88	+0.4
3,335,667	+				-0.4
3,335,667	+				-1.3
3,335,667	+				+1.0
3,335,667	+				-1.6
3,335,667	+				-0.7
3,335,667	+				-0.1
3,335,667	+				-1.1
3,335,667	+				+1.1
3,335,668	-				+0.4
3,335,668	-				-2.7
3,335,668	-				-0.3
3,335,668	-				-0.7
3,335,668	-				-1.1
3,335,668	-				+1.6
3,335,668	-				-0.5
3,335,668	-				-0.3
3,335,668	-				-0.0
3,335,668	-				-0.2
3,335,668	-				+1.3
3,335,668	-				-1.0
3,335,672	+				+0.3
3,335,672	+				+0.3
3,335,673	-				-0.4
3,335,799	+				-0.3
3,335,799	+				-1.6
3,335,799	+				-0.7
3,335,799	+				-0.9
3,335,799	+				-1.8
3,335,799	+				-0.4
3,335,799	+				-1.5
3,335,799	+				-0.4
3,335,799	+				-0.1
3,335,799	+				+0.9
3,335,799	+				+1.1
3,335,799	+				-0.5
3,335,799	+				-1.8
3,335,799	+				+0.5
3,335,799	+				+0.5
3,335,799	+				-2.0
3,335,799	+				-0.7
3,335,799	+				+0.9
3,335,799	+				-0.9
3,335,799	+				-0.6
3,335,799	+				-0.9
3,335,799	+				-0.4
3,335,799	+				+0.9
3,335,799	+				+2.4
3,335,799	+				-1.7
3,335,799	+				+0.4
3,335,799	+				-1.1
3,335,799	+				-0.1
3,335,799	+				+0.2
3,335,799	+				+0.4
3,335,799	+				-0.3
3,335,800	-				-0.7
3,335,800	-				+0.3
3,335,800	-				-2.1
3,335,800	-				+0.3
3,335,800	-				+2.4
3,335,800	-				+1.2
3,335,800	-				-0.9
3,335,800	-				+0.6
3,335,800	-				-2.2
3,335,800	-				-0.1
3,335,800	-				-0.1
3,335,800	-				+0.3
3,335,800	-				-0.6
3,335,800	-				+0.9
3,335,800	-				-0.8
3,335,800	-				+0.2
3,335,800	-				+0.6
3,335,800	-				-0.2
3,335,800	-				+0.7
3,335,800	-				+0.3
3,335,864	-		LRK54_RS15100	0.14	+1.9
3,335,915	+		LRK54_RS15100	0.82	+1.9
3,335,916	-		LRK54_RS15100	0.83	+0.4
3,335,932	-				+2.3
3,335,932	-				-0.7
3,335,932	-				-0.5
3,335,932	-				-1.0
3,335,949	-				+1.1
3,335,949	-				-0.6
3,335,949	-				+1.1
3,335,949	-				+1.9
3,335,949	-				+0.8
3,335,949	-				-0.4
3,335,951	+				-0.1
3,335,951	+				+0.9
3,335,951	+				+1.4
3,335,951	+				-0.9
3,335,952	-				+0.3
3,335,952	-				+0.3
3,335,952	-				+0.7
3,335,952	-				-1.3
3,335,952	-				-0.1
3,335,952	-				-0.0
3,335,952	-				-2.3
3,335,952	-				+1.9
3,335,952	-				+0.9
3,335,952	-				+0.1
3,335,953	+				+0.3
3,335,953	+				+0.3
3,335,954	-				-0.6
3,335,954	-				+0.2
3,335,954	-				-0.4
3,335,954	-				-1.1
3,336,074	+				-0.1
3,336,074	+				+0.4
3,336,074	+				-0.7
3,336,074	+				-1.6
3,336,074	+				-0.0
3,336,074	+				-1.1
3,336,074	+				+0.1
3,336,074	+				+1.0
3,336,074	+				-1.9
3,336,075	-				+0.9
3,336,075	-				-1.3
3,336,075	-				-1.2
3,336,075	-				+0.7
3,336,075	-				+0.1
3,336,075	-				-1.6
3,336,075	-				-0.4
3,336,075	-				-0.6
3,336,075	-				+0.4
3,336,075	-				+0.9
3,336,075	-				+0.6
3,336,075	-				-1.2
3,336,075	-				+0.8
3,336,075	-				+0.8
3,336,075	-				+0.2
3,336,075	-				-0.4
3,336,075	-				-0.9
3,336,075	-				-0.3
3,336,076	+				-1.3
3,336,076	+				-0.6
3,336,076	+				+1.4
3,336,076	+				-0.6
3,336,076	+				-0.6
3,336,076	+				+0.3
3,336,076	+				+0.9
3,336,076	+				+1.4
3,336,076	+				+0.1
3,336,076	+				-0.4
3,336,076	+				-0.5
3,336,076	+				-0.6
3,336,076	+				-0.4
3,336,076	+				-0.6
3,336,076	+				+0.4
3,336,076	+				-0.7
3,336,076	+				-1.0
3,336,076	+				-0.5
3,336,076	+				+0.7
3,336,076	+				-0.7
3,336,076	+				-0.8
3,336,076	+				+1.9
3,336,076	+				+0.1
3,336,076	+				-0.6
3,336,076	+				-1.0
3,336,076	+				+0.5
3,336,076	+				-0.3
3,336,076	+				-1.4
3,336,076	+				-1.1
3,336,076	+				+0.1
3,336,076	+				+0.3
3,336,076	+				-0.1
3,336,076	+				-0.0
3,336,076	+				+1.2
3,336,076	+				-1.7
3,336,076	+				-0.9
3,336,076	+				-0.0
3,336,076	+				-0.4
3,336,076	+				-0.5
3,336,076	+				-1.5
3,336,076	+				-1.5
3,336,076	+				+0.9
3,336,076	+				+0.1
3,336,076	+				-0.4
3,336,076	+				+0.4
3,336,076	+				-1.3
3,336,076	+				-0.3
3,336,076	+				+0.3
3,336,076	+				+0.2
3,336,076	+				+0.9
3,336,076	+				-0.4
3,336,077	-				-1.1
3,336,077	-				-0.0
3,336,077	-				+1.4
3,336,077	-				-1.0
3,336,077	-				+0.9
3,336,077	-				+2.4
3,336,077	-				-0.6
3,336,077	-				-0.7
3,336,077	-				-2.1
3,336,077	-				+0.4
3,336,077	-				+0.4
3,336,077	-				+0.9
3,336,077	-				+0.1
3,336,077	-				-0.5
3,336,077	-				-1.8