Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25210

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
6,135,419	-		CA265_RS25200	0.69	-0.4
6,135,458	+		CA265_RS25200	0.77	+0.5
6,135,458	+		CA265_RS25200	0.77	+0.0
6,135,460	+		CA265_RS25200	0.77	+0.2
6,135,515	+		CA265_RS25200	0.89	-0.7
6,135,576	+				+0.1
6,135,583	-				+0.7
6,135,594	+				-0.8
6,135,604	+				+0.8
6,135,646	+				-1.3
6,135,659	+				-0.1
6,135,668	-		CA265_RS25205	0.10	+0.1
6,135,694	+		CA265_RS25205	0.16	-0.1
6,135,736	-		CA265_RS25205	0.25	-0.1
6,135,740	+		CA265_RS25205	0.26	-0.7
6,135,740	+		CA265_RS25205	0.26	+0.7
6,135,748	-		CA265_RS25205	0.28	+0.5
6,135,846	+		CA265_RS25205	0.50	-0.8
6,135,993	+		CA265_RS25205	0.82	+0.3
6,135,994	-		CA265_RS25205	0.82	+0.4
6,136,029	-				-0.2
6,136,032	-				-0.3
6,136,045	-				+2.0
6,136,047	-				-1.2
6,136,125	+				+0.6
6,136,125	+				+0.4
6,136,127	+				+0.1
6,136,127	+				-0.5
6,136,128	-				-0.0
6,136,155	+				-0.1
6,136,158	+				+1.7
6,136,268	-				-0.2
6,136,284	+				+0.6
6,136,298	-				-1.4
6,136,307	+				+0.3
6,136,328	+				+0.2
6,136,329	-				+0.3
6,136,329	-				-0.4
6,136,329	-				-0.1
6,136,422	+				+0.2
6,136,435	-				-0.3
6,136,475	+		CA265_RS25210	0.14	-0.6
6,136,475	+		CA265_RS25210	0.14	+0.7
6,136,476	-		CA265_RS25210	0.14	-0.2
6,136,476	-		CA265_RS25210	0.14	-0.1
6,136,476	-		CA265_RS25210	0.14	-0.5
6,136,482	+		CA265_RS25210	0.15	+0.7
6,136,483	-		CA265_RS25210	0.16	+0.2
6,136,525	-		CA265_RS25210	0.23	+1.2
6,136,564	+		CA265_RS25210	0.29	+0.1
6,136,609	+		CA265_RS25210	0.37	-0.7
6,136,609	+		CA265_RS25210	0.37	+1.9
6,136,665	+		CA265_RS25210	0.47	+0.3
6,136,724	-		CA265_RS25210	0.57	-0.6
6,136,767	+		CA265_RS25210	0.64	+0.2
6,136,784	-		CA265_RS25210	0.67	+1.1
6,136,786	+		CA265_RS25210	0.67	+0.4
6,136,787	-		CA265_RS25210	0.67	-1.1
6,136,812	+		CA265_RS25210	0.72	+0.2
6,136,877	+		CA265_RS25210	0.83	+0.1
6,136,878	-		CA265_RS25210	0.83	-0.9
6,137,108	+				+0.1
6,137,135	-				+0.6
6,137,148	+				-0.4
6,137,148	+				-0.8
6,137,197	+				+0.4
6,137,198	-				+0.6
6,137,229	+				+2.1
6,137,230	-				-1.0
6,137,230	-				+0.7
6,137,230	-				+1.2
6,137,509	-		CA265_RS25215	0.41	+3.0
6,137,561	-		CA265_RS25215	0.47	+4.1
6,137,561	-		CA265_RS25215	0.47	+2.3
6,137,610	+		CA265_RS25215	0.54	+4.7
6,137,706	+		CA265_RS25215	0.66	+3.4
6,137,706	+		CA265_RS25215	0.66	+3.6
6,137,707	-		CA265_RS25215	0.66	+2.5
6,137,715	+		CA265_RS25215	0.67	+2.8
6,137,723	+		CA265_RS25215	0.68	+3.3
6,137,886	+		CA265_RS25215	0.89	+3.1
6,137,932	+				+3.2
6,137,933	-				+3.2
6,137,933	-				+3.5
6,137,937	-				+2.6