Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25180

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
6,128,939	+				+0.9
6,128,949	-				+1.0
6,128,972	+				-0.7
6,128,973	-				+0.3
6,129,131	-		CA265_RS25175	0.27	+0.3
6,129,131	-		CA265_RS25175	0.27	-0.6
6,129,147	+		CA265_RS25175	0.29	-0.2
6,129,229	-		CA265_RS25175	0.38	-0.2
6,129,260	-				+2.2
6,129,364	+		CA265_RS25175	0.53	-0.1
6,129,423	+		CA265_RS25175	0.60	-0.4
6,129,423	+		CA265_RS25175	0.60	-0.1
6,129,429	-		CA265_RS25175	0.60	-0.2
6,129,517	+		CA265_RS25175	0.70	+0.6
6,129,599	-		CA265_RS25175	0.79	+0.3
6,129,631	+		CA265_RS25175	0.83	+0.2
6,129,632	-		CA265_RS25175	0.83	+0.1
6,129,677	-		CA265_RS25175	0.88	-0.2
6,129,792	+				-0.1
6,129,794	+				+0.6
6,129,795	-				+0.3
6,129,815	+				+0.4
6,129,815	+				-0.5
6,129,889	-				-0.2
6,129,907	+				-0.6
6,129,913	+				-0.1
6,130,025	-		CA265_RS25180	0.23	+0.2
6,130,025	-		CA265_RS25180	0.23	+0.3
6,130,054	-		CA265_RS25180	0.29	+1.6
6,130,067	-		CA265_RS25180	0.31	+0.1
6,130,076	-		CA265_RS25180	0.32	-0.1
6,130,182	-		CA265_RS25180	0.51	+0.2
6,130,195	-		CA265_RS25180	0.54	-0.2
6,130,237	+		CA265_RS25180	0.61	-0.0
6,130,238	-		CA265_RS25180	0.61	+0.4
6,130,262	+		CA265_RS25180	0.65	+0.2
6,130,304	-		CA265_RS25180	0.73	-0.3
6,130,426	+				-0.7
6,130,426	+				-1.5
6,130,486	-				+0.1
6,130,502	+				+0.8
6,130,513	+				+0.4
6,130,574	+				-0.7
6,130,575	-				+0.6
6,130,630	-				+0.7
6,130,652	+				-0.2
6,130,704	-				-0.1
6,130,711	-				-0.1
6,130,728	+				-0.5
6,130,739	-				+0.4
6,130,761	-				+1.4
6,130,761	-				+1.9
6,131,085	+				+3.5
6,131,138	-		CA265_RS25185	0.11	+4.3