Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16150

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
4,055,013	+		CA265_RS16130	0.89	+0.6
4,055,079	+				+0.4
4,055,348	+				-0.3
4,055,348	+				-0.6
4,055,353	-				-1.0
4,055,353	-				-2.0
4,055,373	+				-0.1
4,055,556	-		CA265_RS16140	0.88	-0.1
4,055,586	+				-1.2
4,055,587	-				-1.1
4,055,587	-				-2.1
4,055,590	+				-0.7
4,055,597	+				-1.1
4,055,597	+				+0.4
4,055,597	+				-0.5
4,055,597	+				+0.5
4,055,603	+		CA265_RS16145	0.12	-0.7
4,055,662	+		CA265_RS16145	0.43	-0.9
4,055,689	+		CA265_RS16145	0.58	-0.1
4,055,807	+				+2.4
4,055,807	+				+0.7
4,055,808	-				-1.3
4,055,825	+				-0.6
4,055,834	-				-0.6
4,055,854	-				-0.1
4,055,856	+				-0.9
4,055,907	-				-1.2
4,055,925	+				-0.1
4,055,984	+				+0.3
4,056,014	+				-1.6
4,056,015	-				-1.4
4,056,046	+				-1.8
4,056,116	-		CA265_RS16150	0.16	-0.9
4,056,146	-		CA265_RS16150	0.20	-1.3
4,056,149	-		CA265_RS16150	0.21	+1.2
4,056,160	+		CA265_RS16150	0.22	-0.5
4,056,204	-		CA265_RS16150	0.28	-1.0
4,056,209	-		CA265_RS16150	0.28	+0.0
4,056,212	-		CA265_RS16150	0.29	-0.8
4,056,250	+		CA265_RS16150	0.33	-0.6
4,056,307	+		CA265_RS16150	0.41	-0.9
4,056,385	-		CA265_RS16150	0.50	-1.8
4,056,388	+		CA265_RS16150	0.51	-0.6
4,056,420	-		CA265_RS16150	0.55	-1.3
4,056,458	+		CA265_RS16150	0.59	+1.0
4,056,459	-		CA265_RS16150	0.60	-0.2
4,056,526	+		CA265_RS16150	0.68	+0.4
4,056,526	+		CA265_RS16150	0.68	-0.4
4,056,534	-		CA265_RS16150	0.69	-0.7
4,056,534	-		CA265_RS16150	0.69	-1.9
4,056,638	+		CA265_RS16150	0.82	-0.7
4,056,640	+		CA265_RS16150	0.82	-0.6
4,056,696	-		CA265_RS16150	0.89	-1.4
4,056,773	+				-1.2
4,056,791	-				-0.8
4,056,791	-				+0.4
4,056,791	-				-0.9
4,056,823	-				-0.0
4,056,826	+				-0.4
4,056,892	-				+0.4
4,057,076	+				+0.8
4,057,076	+				+0.0
4,057,171	+		CA265_RS16155	0.21	+1.4
4,057,172	-		CA265_RS16155	0.22	+0.4
4,057,172	-		CA265_RS16155	0.22	+0.3
4,057,172	-		CA265_RS16155	0.22	+0.8
4,057,199	+		CA265_RS16155	0.25	-0.6
4,057,199	+		CA265_RS16155	0.25	-2.4
4,057,216	+		CA265_RS16155	0.28	-0.3
4,057,229	-		CA265_RS16155	0.29	+2.5
4,057,259	+		CA265_RS16155	0.33	+0.0
4,057,340	+		CA265_RS16155	0.45	+1.4
4,057,390	+		CA265_RS16155	0.51	+0.1
4,057,391	-		CA265_RS16155	0.52	+1.6
4,057,391	-		CA265_RS16155	0.52	-0.8
4,057,448	-		CA265_RS16155	0.59	+1.1
4,057,570	-		CA265_RS16155	0.76	+0.7
4,057,570	-		CA265_RS16155	0.76	+0.4
4,057,684	+				+0.2
4,057,684	+				-1.1
4,057,694	+				-1.3
4,057,774	+				+0.5