Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14610

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
3,678,794	+				+1.5
3,678,804	+				+1.1
3,678,804	+				+1.0
3,678,873	+				-0.7
3,678,934	+				+0.3
3,678,987	-				-0.3
3,679,020	-				+0.5
3,679,020	-				+0.1
3,679,054	-				+0.6
3,679,056	-				-0.1
3,679,062	-				+0.9
3,679,095	+				+0.3
3,679,107	+				-1.0
3,679,127	+				-0.7
3,679,162	-				+0.4
3,679,164	-				+0.4
3,679,184	+				+0.1
3,679,245	-				+0.0
3,679,255	-				+0.5
3,679,330	-		CA265_RS14610	0.14	+0.5
3,679,385	-		CA265_RS14610	0.17	+0.6
3,679,409	+		CA265_RS14610	0.19	-1.7
3,679,410	-		CA265_RS14610	0.19	+0.8
3,679,415	+		CA265_RS14610	0.19	+0.3
3,679,465	+		CA265_RS14610	0.22	+0.3
3,679,491	-		CA265_RS14610	0.24	-0.2
3,679,536	+		CA265_RS14610	0.26	+0.2
3,679,537	-		CA265_RS14610	0.26	+1.3
3,679,537	-		CA265_RS14610	0.26	-1.2
3,679,541	+		CA265_RS14610	0.27	+0.3
3,679,541	+		CA265_RS14610	0.27	+0.5
3,679,541	+		CA265_RS14610	0.27	-0.0
3,679,541	+		CA265_RS14610	0.27	+0.2
3,679,541	+		CA265_RS14610	0.27	-0.2
3,679,547	-		CA265_RS14610	0.27	+0.9
3,679,614	-		CA265_RS14610	0.31	+0.4
3,679,622	-		CA265_RS14610	0.31	-0.2
3,679,634	+		CA265_RS14610	0.32	-0.3
3,679,655	-		CA265_RS14610	0.33	+0.6
3,679,714	-		CA265_RS14610	0.37	-0.1
3,679,719	+		CA265_RS14610	0.37	+0.2
3,679,786	-		CA265_RS14610	0.41	+1.0
3,679,800	-		CA265_RS14610	0.42	-0.3
3,679,800	-		CA265_RS14610	0.42	+0.0
3,679,871	-		CA265_RS14610	0.46	+0.6
3,679,874	-		CA265_RS14610	0.46	-0.0
3,679,921	+		CA265_RS14610	0.49	+0.4
3,679,992	-		CA265_RS14610	0.54	-0.1
3,680,047	-		CA265_RS14610	0.57	+0.9
3,680,060	+		CA265_RS14610	0.58	+0.2
3,680,102	+		CA265_RS14610	0.60	+0.1
3,680,102	+		CA265_RS14610	0.60	-0.0
3,680,115	-		CA265_RS14610	0.61	+0.4
3,680,137	+		CA265_RS14610	0.62	+0.3
3,680,248	+		CA265_RS14610	0.69	+0.6
3,680,249	-		CA265_RS14610	0.69	-1.0
3,680,410	-		CA265_RS14610	0.78	+0.2
3,680,431	+		CA265_RS14610	0.80	+0.8
3,680,588	-		CA265_RS14610	0.89	-1.0
3,680,633	+				+0.9
3,680,739	+				+0.6
3,680,740	-				-0.8
3,680,805	-				+0.5
3,680,805	-				+0.3
3,680,807	+				-0.0
3,680,807	+				-0.6
3,680,861	-		CA265_RS14615	0.15	+0.4
3,680,883	+		CA265_RS14615	0.27	-0.3
3,680,890	+		CA265_RS14615	0.31	-0.8
3,680,919	-		CA265_RS14615	0.47	-1.7
3,680,963	+		CA265_RS14615	0.72	+0.7
3,680,969	+		CA265_RS14615	0.75	+0.1
3,680,970	-		CA265_RS14615	0.76	-1.4
3,681,017	-				-0.4
3,681,019	-				-0.4
3,681,023	+				-0.8
3,681,024	-				+0.1
3,681,062	+				-0.2
3,681,062	+				+1.4
3,681,072	-		CA265_RS14620	0.10	-0.1
3,681,078	-		CA265_RS14620	0.11	-1.7
3,681,094	-		CA265_RS14620	0.15	-0.1
3,681,159	+		CA265_RS14620	0.28	-0.5
3,681,210	-		CA265_RS14620	0.39	+0.5
3,681,215	-		CA265_RS14620	0.40	+0.4
3,681,289	-		CA265_RS14620	0.56	-0.1
3,681,289	-		CA265_RS14620	0.56	+0.2
3,681,338	+		CA265_RS14620	0.66	+0.2
3,681,476	-				+0.0
3,681,479	+				+0.2
3,681,564	-		CA265_RS14625	0.10	+0.5
3,681,564	-		CA265_RS14625	0.10	+0.6
3,681,564	-		CA265_RS14625	0.10	+0.1
3,681,583	-		CA265_RS14625	0.14	+0.5
3,681,583	-		CA265_RS14625	0.14	+1.8
3,681,618	-		CA265_RS14625	0.19	+0.4
3,681,621	-		CA265_RS14625	0.20	+0.9
3,681,624	+		CA265_RS14625	0.20	+0.9
3,681,641	+		CA265_RS14625	0.23	+0.9
3,681,705	-		CA265_RS14625	0.34	+1.7
3,681,726	-		CA265_RS14625	0.37	+0.7
3,681,730	-		CA265_RS14625	0.38	+1.6
3,681,730	-		CA265_RS14625	0.38	+0.6