Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29340

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
6,374,707	+		AO353_29335	0.42	+0.7
6,374,742	+		AO353_29335	0.44	-0.8
6,374,742	+		AO353_29335	0.44	+0.8
6,374,742	+		AO353_29335	0.44	-0.4
6,374,743	-		AO353_29335	0.45	+0.2
6,374,743	-		AO353_29335	0.45	-0.6
6,374,743	-		AO353_29335	0.45	+1.2
6,374,764	+		AO353_29335	0.46	-0.2
6,374,765	-		AO353_29335	0.46	+1.4
6,374,813	+		AO353_29335	0.50	+0.7
6,374,813	+		AO353_29335	0.50	-0.2
6,374,813	+		AO353_29335	0.50	+0.0
6,374,813	+		AO353_29335	0.50	+2.0
6,374,813	+		AO353_29335	0.50	+1.7
6,374,813	+		AO353_29335	0.50	-0.8
6,374,813	+		AO353_29335	0.50	-0.9
6,374,813	+		AO353_29335	0.50	-0.7
6,374,813	+		AO353_29335	0.50	-0.6
6,374,813	+		AO353_29335	0.50	-0.5
6,374,813	+		AO353_29335	0.50	-0.4
6,374,813	+		AO353_29335	0.50	-0.6
6,374,813	+		AO353_29335	0.50	-1.0
6,374,814	-		AO353_29335	0.50	+1.0
6,374,814	-		AO353_29335	0.50	+1.3
6,374,814	-		AO353_29335	0.50	+1.4
6,374,814	-		AO353_29335	0.50	+1.9
6,374,814	-		AO353_29335	0.50	-0.8
6,374,814	-		AO353_29335	0.50	+0.3
6,374,814	-		AO353_29335	0.50	-0.6
6,374,814	-		AO353_29335	0.50	-0.3
6,374,814	-		AO353_29335	0.50	+0.0
6,374,814	-		AO353_29335	0.50	+1.4
6,374,814	-		AO353_29335	0.50	-1.1
6,374,814	-		AO353_29335	0.50	+0.8
6,374,814	-		AO353_29335	0.50	+0.3
6,374,814	-		AO353_29335	0.50	-0.1
6,374,814	-		AO353_29335	0.50	-0.1
6,374,814	-		AO353_29335	0.50	-1.9
6,374,911	+		AO353_29335	0.58	-2.5
6,374,911	+		AO353_29335	0.58	-2.5
6,374,911	+		AO353_29335	0.58	-0.5
6,374,912	-		AO353_29335	0.58	-0.0
6,374,912	-		AO353_29335	0.58	-0.6
6,374,912	-		AO353_29335	0.58	-0.2
6,374,912	-		AO353_29335	0.58	-0.9
6,374,912	-		AO353_29335	0.58	-1.2
6,374,912	-		AO353_29335	0.58	+1.2
6,374,947	+		AO353_29335	0.61	+1.2
6,375,028	+		AO353_29335	0.68	-0.6
6,375,201	-		AO353_29335	0.82	-1.0
6,375,415	+				+0.2
6,375,415	+				+1.2
6,375,415	+				-1.4
6,375,415	+				-0.4
6,375,415	+				-0.6
6,375,416	-				+0.1
6,375,416	-				-0.1
6,375,416	-				-0.7
6,375,416	-				+0.4
6,375,416	-				-0.6
6,375,416	-				-0.9
6,375,442	+				-0.3
6,375,443	-				+0.2
6,375,443	-				+1.0
6,375,443	-				+0.1
6,375,513	+				+0.1
6,375,514	-				+4.0
6,375,514	-				-0.4
6,375,519	+				-0.6
6,375,520	-				+0.7
6,375,520	-				-1.0
6,375,520	-				-0.1
6,375,546	-				-0.1
6,375,564	+				-1.1
6,375,564	+				+0.2
6,375,564	+				+0.4
6,375,565	-				+0.4
6,375,565	-				-1.3
6,375,565	-				-2.0
6,375,585	+				-0.2
6,375,585	+				+0.6
6,375,585	+				-0.7
6,375,585	+				-0.6
6,375,585	+				-0.3
6,375,585	+				+1.1
6,375,585	+				+0.1
6,375,585	+				-0.4
6,375,585	+				+0.3
6,375,585	+				+2.4
6,375,586	-				+0.0
6,375,586	-				-0.9
6,375,586	-				-0.0
6,375,586	-				+0.1
6,375,586	-				-0.6
6,375,586	-				-1.0
6,375,586	-				+1.4
6,375,586	-				-0.4
6,375,586	-				+0.6
6,375,586	-				+0.6
6,375,590	+				-0.7
6,375,590	+				+1.1
6,375,590	+				-0.6
6,375,590	+				+0.9
6,375,590	+				-0.9
6,375,590	+				+0.9
6,375,590	+				-0.7
6,375,591	-				+0.2
6,375,591	-				-1.3
6,375,591	-				-0.9
6,375,591	-				+0.6
6,375,591	-				-0.5
6,375,591	-				+0.4
6,375,602	+				-0.4
6,375,602	+				+1.1
6,375,603	-				-2.9
6,375,603	-				-0.4
6,375,603	-				+0.9
6,375,603	-				+0.1
6,375,603	-				+0.3
6,375,610	+				-0.2
6,375,610	+				+0.9
6,375,611	-				+0.1
6,375,611	-				+0.1
6,375,780	-		AO353_29340	0.43	-1.1
6,375,780	-		AO353_29340	0.43	-1.6
6,375,813	+		AO353_29340	0.58	-1.4
6,375,813	+		AO353_29340	0.58	-0.7
6,375,814	-		AO353_29340	0.59	-1.1
6,375,814	-		AO353_29340	0.59	+0.4
6,375,927	+				-0.9
6,375,927	+				+1.1
6,375,927	+				-1.0
6,375,928	-				-2.0
6,375,928	-				+0.4
6,375,953	+				-2.3
6,375,953	+				-0.2
6,376,046	+				-0.9
6,376,046	+				+1.4
6,376,080	-				-0.4
6,376,113	+				-0.1
6,376,113	+				-0.9
6,376,113	+				+0.9
6,376,113	+				-0.6
6,376,114	-				-0.6
6,376,114	-				+0.4
6,376,262	-		AO353_29345	0.19	-0.9
6,376,262	-		AO353_29345	0.19	+0.5
6,376,262	-		AO353_29345	0.19	+1.4
6,376,262	-		AO353_29345	0.19	-0.0
6,376,415	-		AO353_29345	0.37	+1.3
6,376,415	-		AO353_29345	0.37	+0.2
6,376,415	-		AO353_29345	0.37	-0.1
6,376,415	-		AO353_29345	0.37	-1.8
6,376,426	+		AO353_29345	0.39	-0.8
6,376,426	+		AO353_29345	0.39	-0.8
6,376,426	+		AO353_29345	0.39	+1.4
6,376,426	+		AO353_29345	0.39	-1.2
6,376,426	+		AO353_29345	0.39	+0.4
6,376,427	-		AO353_29345	0.39	-0.9
6,376,588	+		AO353_29345	0.58	-0.4
6,376,588	+		AO353_29345	0.58	-1.6
6,376,588	+		AO353_29345	0.58	+0.1
6,376,588	+		AO353_29345	0.58	+0.1
6,376,588	+		AO353_29345	0.58	+0.1
6,376,588	+		AO353_29345	0.58	-1.3
6,376,588	+		AO353_29345	0.58	+0.9
6,376,589	-		AO353_29345	0.59	+1.0
6,376,589	-		AO353_29345	0.59	-1.6
6,376,589	-		AO353_29345	0.59	-1.4
6,376,663	+		AO353_29345	0.68	+1.4
6,376,663	+		AO353_29345	0.68	+1.4
6,376,663	+		AO353_29345	0.68	-0.3
6,376,663	+		AO353_29345	0.68	-1.6
6,376,663	+		AO353_29345	0.68	-0.7
6,376,663	+		AO353_29345	0.68	+1.1
6,376,663	+		AO353_29345	0.68	-0.4
6,376,664	-		AO353_29345	0.68	+1.0
6,376,664	-		AO353_29345	0.68	-2.4
6,376,664	-		AO353_29345	0.68	+0.0
6,376,664	-		AO353_29345	0.68	+0.3
6,376,664	-		AO353_29345	0.68	-1.9
6,376,664	-		AO353_29345	0.68	-0.3
6,376,731	+		AO353_29345	0.76	+0.4