Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24380

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
5,361,395	-		AO353_24375	0.49	+1.3
5,361,509	-		AO353_24375	0.55	+1.3
5,361,509	-		AO353_24375	0.55	+1.3
5,361,722	+		AO353_24375	0.67	-1.0
5,361,722	+		AO353_24375	0.67	+0.1
5,361,723	-		AO353_24375	0.67	-0.2
5,361,723	-		AO353_24375	0.67	+1.3
5,361,723	-		AO353_24375	0.67	-0.8
5,361,723	-		AO353_24375	0.67	+0.7
5,361,723	-		AO353_24375	0.67	+0.5
5,361,723	-		AO353_24375	0.67	+0.3
5,361,723	-		AO353_24375	0.67	+0.7
5,361,802	-		AO353_24375	0.71	+0.3
5,362,120	-		AO353_24375	0.89	+0.3
5,362,120	-		AO353_24375	0.89	-0.2
5,362,267	+				+0.7
5,362,267	+				-0.3
5,362,289	+				+1.1
5,362,289	+				+0.9
5,362,290	-				-0.5
5,362,290	-				+0.9
5,362,290	-				+0.4
5,362,290	-				+1.3
5,362,290	-				+1.0
5,362,290	-				-0.0
5,362,290	-				-0.5
5,362,323	+				-0.7
5,362,324	-				-0.9
5,362,324	-				+1.9
5,362,357	-				-0.1
5,362,359	+				+0.3
5,362,359	+				-1.1
5,362,359	+				-0.5
5,362,359	+				-0.9
5,362,359	+				+0.5
5,362,359	+				-0.0
5,362,360	-				-0.9
5,362,360	-				-1.0
5,362,379	+		AO353_24380	0.10	-1.3
5,362,379	+		AO353_24380	0.10	-0.7
5,362,379	+		AO353_24380	0.10	+0.3
5,362,379	+		AO353_24380	0.10	+0.8
5,362,380	-		AO353_24380	0.11	-1.5
5,362,380	-		AO353_24380	0.11	+0.5
5,362,401	+		AO353_24380	0.15	+0.5
5,362,402	-		AO353_24380	0.15	+0.7
5,362,413	-		AO353_24380	0.17	+0.3
5,362,446	+		AO353_24380	0.23	-0.2
5,362,446	+		AO353_24380	0.23	-0.9
5,362,446	+		AO353_24380	0.23	-0.8
5,362,446	+		AO353_24380	0.23	+0.6
5,362,446	+		AO353_24380	0.23	-0.0
5,362,447	-		AO353_24380	0.23	+0.7
5,362,447	-				-0.7
5,362,447	-		AO353_24380	0.23	-1.0
5,362,447	-		AO353_24380	0.23	+0.3
5,362,502	+		AO353_24380	0.34	-1.9
5,362,555	+		AO353_24380	0.44	-0.0
5,362,555	+		AO353_24380	0.44	-1.3
5,362,555	+		AO353_24380	0.44	-2.7
5,362,555	+		AO353_24380	0.44	-0.3
5,362,555	+		AO353_24380	0.44	-1.4
5,362,555	+		AO353_24380	0.44	-1.7
5,362,555	+		AO353_24380	0.44	+0.3
5,362,556	-		AO353_24380	0.44	-0.4
5,362,585	-		AO353_24380	0.50	-1.2
5,362,604	+		AO353_24380	0.53	+0.6
5,362,604	+		AO353_24380	0.53	-2.1
5,362,605	-		AO353_24380	0.54	+0.9
5,362,619	+		AO353_24380	0.56	+0.2
5,362,644	+		AO353_24380	0.61	-1.3
5,362,644	+		AO353_24380	0.61	-0.9
5,362,644	+		AO353_24380	0.61	-0.9
5,362,650	+		AO353_24380	0.62	+0.1
5,362,651	-		AO353_24380	0.62	-0.7
5,362,651	-		AO353_24380	0.62	+0.3
5,362,732	-		AO353_24380	0.78	-0.1
5,362,751	+		AO353_24380	0.82	-1.2
5,362,751	+		AO353_24380	0.82	-0.9
5,362,751	+		AO353_24380	0.82	-2.2
5,362,751	+		AO353_24380	0.82	-0.1
5,362,751	+		AO353_24380	0.82	+2.3
5,362,751	+		AO353_24380	0.82	-0.0
5,362,751	+		AO353_24380	0.82	+0.7
5,362,751	+		AO353_24380	0.82	-0.2
5,362,751	+		AO353_24380	0.82	-0.4
5,362,752	-		AO353_24380	0.82	-0.7
5,362,752	-		AO353_24380	0.82	-1.4
5,362,752	-		AO353_24380	0.82	-0.1
5,362,752	-		AO353_24380	0.82	+0.5
5,362,752	-		AO353_24380	0.82	-1.7
5,362,752	-		AO353_24380	0.82	-0.7
5,362,752	-		AO353_24380	0.82	+0.8
5,362,752	-		AO353_24380	0.82	+1.9
5,362,752	-		AO353_24380	0.82	+0.9
5,362,752	-		AO353_24380	0.82	-1.0
5,362,752	-		AO353_24380	0.82	-3.4
5,362,752	-		AO353_24380	0.82	-0.2
5,362,752	-		AO353_24380	0.82	-1.0
5,362,757	+		AO353_24380	0.83	-1.2
5,362,758	-		AO353_24380	0.83	+0.1
5,362,758	-		AO353_24380	0.83	-0.8
5,362,830	+				-0.6
5,362,830	+				-0.4
5,362,831	-				-0.5
5,362,831	-				-2.0
5,362,936	+				+0.4
5,362,936	+				-0.7
5,362,937	-				-0.7
5,362,937	-				+1.3
5,362,937	-				-0.7
5,363,053	-				-0.0
5,363,053	-				+1.0
5,363,077	+		AO353_24385	0.18	-0.6
5,363,148	-		AO353_24385	0.51	+0.3
5,363,148	-		AO353_24385	0.51	-0.7
5,363,237	+				-0.3
5,363,238	-				+0.3
5,363,238	-				-0.5
5,363,240	+				-1.3
5,363,255	+				-0.4
5,363,256	-				-0.9
5,363,256	-				-1.3
5,363,280	+				+0.3
5,363,280	+				-0.0
5,363,282	+				-0.1
5,363,282	+				+1.0
5,363,282	+				+0.4
5,363,283	-				-0.3
5,363,283	-				+0.9
5,363,283	-				-0.5
5,363,283	-				+0.7
5,363,283	-				-1.0
5,363,283	-				-1.5
5,363,283	-				+0.6
5,363,305	+				-1.1
5,363,306	-				+0.1
5,363,334	-				-1.4
5,363,334	-				+1.1
5,363,345	-				-0.4
5,363,362	+				+1.3
5,363,362	+				+0.6
5,363,363	-				+2.3
5,363,363	-				+0.2
5,363,363	-				-0.5
5,363,374	+				+1.3
5,363,405	+				+2.0
5,363,406	-				+0.4
5,363,406	-				-0.1
5,363,426	+				-0.3
5,363,426	+				-1.0
5,363,426	+				-0.0
5,363,427	-				+0.4
5,363,427	-				-1.0
5,363,480	+				-0.1
5,363,480	+				-1.0
5,363,480	+				+0.4
5,363,480	+				+1.7
5,363,480	+				-1.3
5,363,498	+				-0.7
5,363,498	+				-1.1
5,363,499	-				+1.0
5,363,528	+				-1.6
5,363,529	-				-2.6
5,363,531	+				+0.7
5,363,531	+				-1.0
5,363,531	+				+0.5
5,363,532	-				-1.7
5,363,532	-				+1.3
5,363,532	-				+0.3
5,363,532	-				-1.0
5,363,532	-				+2.3
5,363,532	-				+1.3
5,363,574	+		AO353_24390	0.13	-1.0
5,363,574	+		AO353_24390	0.13	-1.4
5,363,574	+		AO353_24390	0.13	+1.3
5,363,575	-		AO353_24390	0.13	-2.3
5,363,575	-		AO353_24390	0.13	-1.3
5,363,603	+		AO353_24390	0.16	+0.3
5,363,603	+		AO353_24390	0.16	-1.9
5,363,603	+		AO353_24390	0.16	-0.3
5,363,702	+		AO353_24390	0.24	+0.9
5,363,702	+		AO353_24390	0.24	-0.0
5,363,703	-		AO353_24390	0.24	+0.7
5,363,703	-		AO353_24390	0.24	-0.3
5,363,766	-		AO353_24390	0.30	-0.7
5,363,766	-		AO353_24390	0.30	-2.2
5,363,766	-		AO353_24390	0.30	-0.5
5,363,766	-		AO353_24390	0.30	+0.6
5,363,766	-		AO353_24390	0.30	-0.0
5,363,766	-		AO353_24390	0.30	-1.4
5,363,785	+		AO353_24390	0.31	-0.0
5,363,786	-		AO353_24390	0.32	+0.9
5,363,786	-		AO353_24390	0.32	-0.1