Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21415

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
4,688,384	+		AO353_21405	0.68	-0.4
4,688,385	-		AO353_21405	0.68	-0.3
4,688,385	-		AO353_21405	0.68	-0.4
4,688,399	+		AO353_21405	0.69	-2.3
4,688,399	+		AO353_21405	0.69	-0.1
4,688,399	+		AO353_21405	0.69	-2.0
4,688,399	+		AO353_21405	0.69	+0.7
4,688,400	-		AO353_21405	0.69	-0.1
4,688,400	-		AO353_21405	0.69	-1.1
4,688,400	-		AO353_21405	0.69	-0.4
4,688,498	+		AO353_21405	0.75	+0.8
4,688,498	+		AO353_21405	0.75	+0.2
4,688,498	+		AO353_21405	0.75	-0.5
4,688,498	+		AO353_21405	0.75	+1.7
4,688,498	+		AO353_21405	0.75	+0.2
4,688,498	+		AO353_21405	0.75	+0.2
4,688,498	+		AO353_21405	0.75	-2.4
4,688,499	-		AO353_21405	0.75	-0.5
4,688,499	-		AO353_21405	0.75	-0.1
4,688,499	-		AO353_21405	0.75	-1.0
4,688,499	-		AO353_21405	0.75	+0.8
4,688,499	-		AO353_21405	0.75	-1.7
4,688,499	-		AO353_21405	0.75	-0.9
4,688,642	+		AO353_21405	0.84	-0.1
4,688,643	-		AO353_21405	0.84	-0.6
4,688,643	-		AO353_21405	0.84	-1.7
4,688,646	+		AO353_21405	0.84	-0.6
4,688,646	+		AO353_21405	0.84	+0.5
4,688,691	+		AO353_21405	0.87	+0.9
4,688,691	+		AO353_21405	0.87	-1.1
4,688,691	+		AO353_21405	0.87	+1.2
4,688,691	+		AO353_21405	0.87	-0.4
4,688,692	-		AO353_21405	0.87	-0.1
4,688,692	-		AO353_21405	0.87	-0.2
4,688,692	-		AO353_21405	0.87	+0.5
4,688,692	-		AO353_21405	0.87	-0.3
4,688,692	-		AO353_21405	0.87	-0.8
4,688,692	-		AO353_21405	0.87	-0.3
4,688,692	-		AO353_21405	0.87	+1.3
4,688,696	-		AO353_21405	0.87	-1.5
4,688,696	-		AO353_21405	0.87	-0.2
4,688,775	+				-0.5
4,688,775	+				+0.5
4,688,775	+				+1.1
4,688,776	-				-1.2
4,688,776	-				-0.1
4,688,776	-				-0.9
4,688,776	-				+0.3
4,688,778	+				-1.0
4,688,778	+				-0.7
4,688,778	+				-1.3
4,688,779	-				-0.4
4,688,779	-				-0.0
4,688,779	-				-0.7
4,688,789	+				+0.4
4,688,789	+				-0.2
4,688,789	+				+1.3
4,688,789	+				-0.5
4,688,789	+				-1.3
4,688,789	+				-0.6
4,688,789	+				-1.8
4,688,789	+				+1.3
4,688,789	+				+0.5
4,688,789	+				+0.2
4,688,789	+				+2.5
4,688,789	+				+1.5
4,688,789	+				-0.3
4,688,789	+				+0.3
4,688,789	+				+0.4
4,688,789	+				+1.3
4,688,790	-				+0.7
4,688,790	-				-3.0
4,688,790	-				-1.4
4,688,790	-				-1.3
4,688,790	-				-0.1
4,688,790	-				-0.4
4,688,790	-				-0.1
4,688,790	-				-1.7
4,688,790	-				-1.3
4,688,790	-				+2.1
4,688,790	-				-0.8
4,688,790	-				+1.8
4,688,791	+				+0.5
4,688,876	+				-1.0
4,688,963	-				+0.5
4,688,986	-				-0.6
4,689,167	-		AO353_21410	0.65	-0.3
4,689,184	+		AO353_21410	0.73	+1.1
4,689,184	+		AO353_21410	0.73	-0.5
4,689,184	+		AO353_21410	0.73	+0.7
4,689,185	-		AO353_21410	0.74	-1.1
4,689,236	+				-0.2
4,689,236	+				+0.5
4,689,236	+				-2.1
4,689,237	-				+0.0
4,689,396	+		AO353_21415	0.50	-2.2
4,689,396	+		AO353_21415	0.50	+0.9
4,689,396	+		AO353_21415	0.50	-0.8
4,689,397	-		AO353_21415	0.50	-1.7
4,689,397	-		AO353_21415	0.50	+0.2
4,689,397	-		AO353_21415	0.50	-0.1
4,689,431	+		AO353_21415	0.65	-2.1
4,689,431	+		AO353_21415	0.65	+0.7
4,689,431	+		AO353_21415	0.65	-0.2
4,689,432	-		AO353_21415	0.65	-1.8
4,689,432	-		AO353_21415	0.65	-1.1
4,689,432	-		AO353_21415	0.65	-0.6
4,689,432	-		AO353_21415	0.65	+0.9
4,689,432	-		AO353_21415	0.65	-1.3
4,689,432	-		AO353_21415	0.65	+0.9
4,689,432	-		AO353_21415	0.65	-0.2
4,689,513	+				+0.3
4,689,514	-				-0.3
4,689,532	+				-1.3
4,689,532	+				+0.3
4,689,533	-				+1.5
4,689,533	-				-0.4
4,689,620	+				-0.5
4,689,621	-				+0.3
4,689,621	-				-1.3
4,689,621	-				-1.6
4,689,621	-				-0.9
4,689,621	-				-0.7
4,689,737	+		AO353_21420	0.34	-0.5
4,689,738	-		AO353_21420	0.35	+0.1
4,689,738	-		AO353_21420	0.35	+0.0
4,689,749	-		AO353_21420	0.41	+1.5
4,689,816	+		AO353_21420	0.76	-1.5
4,689,816	+		AO353_21420	0.76	-1.1
4,689,816	+		AO353_21420	0.76	+1.5
4,689,816	+		AO353_21420	0.76	+0.0
4,689,816	+		AO353_21420	0.76	-0.1
4,689,816	+		AO353_21420	0.76	-0.3
4,689,817	-		AO353_21420	0.76	-2.9
4,689,817	-		AO353_21420	0.76	+1.8
4,689,817	-				-0.5
4,689,817	-		AO353_21420	0.76	-0.5
4,689,817	-		AO353_21420	0.76	-0.3
4,689,817	-		AO353_21420	0.76	+0.6
4,689,817	-		AO353_21420	0.76	-1.1
4,689,817	-		AO353_21420	0.76	-0.1
4,689,817	-		AO353_21420	0.76	-0.7
4,689,817	-		AO353_21420	0.76	+0.9
4,689,817	-		AO353_21420	0.76	-0.1
4,689,817	-				-0.5
4,689,862	+				-1.1
4,689,862	+				-0.1
4,689,862	+				-0.3
4,689,862	+				-1.1
4,689,863	-				+3.8
4,689,863	-				-1.0
4,689,863	-				-0.9
4,689,877	+				-0.1
4,689,878	-				-0.6
4,689,895	-				-0.5
4,689,906	+				+0.5
4,689,906	+				+0.7
4,689,907	-				-1.1
4,689,907	-				+2.5
4,689,907	-				+1.5
4,689,907	-				-1.5
4,689,907	-				+1.2
4,689,907	-				-0.4
4,689,907	-				-0.1
4,689,911	-				-0.5
4,689,916	-				-1.8
4,689,916	-				-1.5
4,689,935	-				-0.1
4,689,935	-				-1.6
4,689,967	+				-1.6
4,689,967	+				-0.9
4,689,968	-				-0.5
4,689,968	-				-0.1
4,689,968	-				-0.5
4,689,971	+				-0.5
4,689,971	+				+0.1
4,689,972	-				+0.0
4,689,972	-				-1.3
4,689,994	-				-2.2
4,689,994	-				-0.1
4,689,994	-				+1.5
4,690,032	-				+0.5
4,690,032	-				-2.5
4,690,036	+				-0.9
4,690,036	+				-0.5
4,690,036	+				+0.5
4,690,036	+				+0.1
4,690,036	+				-0.2
4,690,037	-				+0.9
4,690,040	+				-0.1
4,690,041	-				-1.0
4,690,049	-				-1.3
4,690,049	-				-1.0
4,690,126	+				+2.5
4,690,126	+				-0.9
4,690,127	-				-0.3
4,690,127	-				-2.3
4,690,127	-				-0.5
4,690,138	-				-0.4
4,690,243	+				-0.9
4,690,243	+				+1.7
4,690,243	+				-2.2
4,690,281	+				-1.7
4,690,282	-				-1.1
4,690,282	-				-1.5
4,690,285	+				-1.0
4,690,285	+				-2.0
4,690,285	+				-1.3
4,690,286	-				-1.3
4,690,286	-				-3.2
4,690,286	-				-0.9
4,690,286	-				-0.7
4,690,286	-				+0.5
4,690,286	-				-0.6
4,690,365	-		AO353_21425	0.16	+0.2
4,690,390	+		AO353_21425	0.21	-0.4
4,690,394	+				-0.9
4,690,395	-		AO353_21425	0.22	-0.4
4,690,395	-		AO353_21425	0.22	-1.7
4,690,395	-		AO353_21425	0.22	-0.9
4,690,395	-		AO353_21425	0.22	-1.3
4,690,395	-		AO353_21425	0.22	-0.9
4,690,395	-		AO353_21425	0.22	+0.5