Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15985

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
3,530,705	-		AO353_15980	0.46	-2.9
3,530,712	+		AO353_15980	0.47	-0.7
3,530,782	+		AO353_15980	0.52	-1.3
3,530,783	-		AO353_15980	0.52	-1.9
3,530,783	-		AO353_15980	0.52	-1.1
3,530,783	-		AO353_15980	0.52	-2.2
3,530,783	-		AO353_15980	0.52	-1.4
3,530,783	-		AO353_15980	0.52	-2.3
3,530,857	-		AO353_15980	0.57	-0.4
3,530,998	+		AO353_15980	0.67	-2.7
3,530,998	+		AO353_15980	0.67	-2.7
3,530,999	-		AO353_15980	0.67	-1.8
3,530,999	-		AO353_15980	0.67	-1.4
3,530,999	-		AO353_15980	0.67	-0.5
3,530,999	-		AO353_15980	0.67	-1.9
3,531,075	+		AO353_15980	0.72	-2.0
3,531,142	+		AO353_15980	0.77	-2.3
3,531,142	+		AO353_15980	0.77	-1.8
3,531,142	+		AO353_15980	0.77	-1.8
3,531,142	+		AO353_15980	0.77	-3.3
3,531,142	+		AO353_15980	0.77	-3.5
3,531,142	+		AO353_15980	0.77	-1.7
3,531,142	+		AO353_15980	0.77	-2.5
3,531,142	+		AO353_15980	0.77	-2.4
3,531,142	+		AO353_15980	0.77	-1.1
3,531,142	+		AO353_15980	0.77	-1.8
3,531,142	+		AO353_15980	0.77	-2.2
3,531,142	+		AO353_15980	0.77	-2.5
3,531,142	+		AO353_15980	0.77	-0.1
3,531,142	+		AO353_15980	0.77	-1.8
3,531,142	+		AO353_15980	0.77	-2.4
3,531,142	+		AO353_15980	0.77	-2.3
3,531,142	+		AO353_15980	0.77	-2.1
3,531,143	-		AO353_15980	0.77	-1.8
3,531,143	-		AO353_15980	0.77	-3.2
3,531,143	-		AO353_15980	0.77	-1.5
3,531,143	-		AO353_15980	0.77	-1.4
3,531,143	-		AO353_15980	0.77	-1.7
3,531,143	-		AO353_15980	0.77	-2.4
3,531,143	-		AO353_15980	0.77	-3.9
3,531,143	-		AO353_15980	0.77	-1.5
3,531,143	-		AO353_15980	0.77	+0.1
3,531,143	-		AO353_15980	0.77	-0.7
3,531,143	-		AO353_15980	0.77	-2.6
3,531,143	-		AO353_15980	0.77	-1.7
3,531,144	+		AO353_15980	0.77	-2.4
3,531,144	+		AO353_15980	0.77	-1.7
3,531,145	-		AO353_15980	0.77	-0.7
3,531,145	-		AO353_15980	0.77	-0.7
3,531,165	+		AO353_15980	0.78	-0.7
3,531,199	+		AO353_15980	0.80	-2.7
3,531,244	+		AO353_15980	0.84	-1.8
3,531,244	+		AO353_15980	0.84	-2.5
3,531,259	+		AO353_15980	0.85	+0.9
3,531,259	+		AO353_15980	0.85	-2.7
3,531,260	-		AO353_15980	0.85	-2.6
3,531,478	+				-0.9
3,531,479	-				-0.7
3,531,479	-				-2.5
3,531,576	+				-1.9
3,531,576	+				-1.4
3,531,577	-				-0.9
3,531,577	-				-1.9
3,531,650	+				-3.1
3,531,651	-				-1.1
3,531,651	-				-0.7
3,531,651	-				-0.9
3,531,700	+				-2.7
3,531,700	+				-0.4
3,531,700	+				-2.8
3,531,701	-				-2.4
3,531,709	+				-2.1
3,531,709	+				-2.0
3,531,709	+				-2.5
3,531,709	+				-0.4
3,531,710	-				-1.8
3,531,781	+				-0.1
3,531,782	-				-2.2
3,531,782	-				-2.5
3,531,854	-		AO353_15985	0.11	-1.1
3,531,868	+		AO353_15985	0.12	-1.1
3,531,868	+		AO353_15985	0.12	-1.1
3,531,869	-		AO353_15985	0.12	-1.8
3,531,869	-		AO353_15985	0.12	-0.4
3,531,871	+		AO353_15985	0.12	-2.0
3,531,871	+		AO353_15985	0.12	-0.1
3,531,871	+				+1.9
3,531,871	+		AO353_15985	0.12	-1.4
3,531,872	-		AO353_15985	0.12	+0.3
3,531,889	+		AO353_15985	0.13	-0.4
3,532,042	+		AO353_15985	0.22	+1.9
3,532,043	-		AO353_15985	0.22	-1.7
3,532,043	-		AO353_15985	0.22	-2.9
3,532,043	-		AO353_15985	0.22	-1.3
3,532,043	-		AO353_15985	0.22	+0.9
3,532,102	+		AO353_15985	0.26	-0.1
3,532,123	+		AO353_15985	0.27	-0.1
3,532,124	-		AO353_15985	0.27	+0.3
3,532,124	-		AO353_15985	0.27	-1.5
3,532,124	-		AO353_15985	0.27	-1.4
3,532,313	-		AO353_15985	0.39	-1.1
3,532,313	-		AO353_15985	0.39	-2.4
3,532,339	+				+1.9
3,532,340	-		AO353_15985	0.40	-1.9
3,532,340	-		AO353_15985	0.40	-1.1
3,532,340	-		AO353_15985	0.40	-0.9
3,532,340	-		AO353_15985	0.40	-0.9
3,532,340	-		AO353_15985	0.40	-1.5
3,532,340	-		AO353_15985	0.40	-2.0
3,532,340	-		AO353_15985	0.40	-0.4
3,532,340	-		AO353_15985	0.40	-3.2
3,532,340	-		AO353_15985	0.40	-0.1
3,532,340	-		AO353_15985	0.40	-2.9
3,532,340	-		AO353_15985	0.40	-2.6
3,532,340	-		AO353_15985	0.40	-2.0
3,532,340	-		AO353_15985	0.40	-1.8
3,532,340	-		AO353_15985	0.40	-2.3
3,532,614	+				-0.4
3,532,730	-		AO353_15985	0.64	-1.9
3,532,730	-		AO353_15985	0.64	-2.3
3,532,730	-		AO353_15985	0.64	-1.4
3,532,811	-		AO353_15985	0.69	-2.3
3,532,811	-		AO353_15985	0.69	-0.7
3,533,117	-		AO353_15985	0.88	-2.9
3,533,165	-				-1.1
3,533,288	-				-1.9
3,533,432	+				-0.9
3,533,432	+				-0.1
3,533,432	+				-1.5
3,533,432	+				-2.4
3,533,432	+				-0.4
3,533,433	-				-1.9
3,533,433	-				-0.1
3,533,433	-				+0.3
3,533,433	-				-2.5
3,533,439	+				-2.3
3,533,469	-				-0.9
3,533,469	-				-1.5
3,533,584	+		AO353_15990	0.13	-2.5
3,533,585	-		AO353_15990	0.14	-1.4
3,533,585	-		AO353_15990	0.14	-0.7
3,533,611	+		AO353_15990	0.16	-0.7
3,533,612	-		AO353_15990	0.16	-1.4
3,533,692	+		AO353_15990	0.22	-0.9
3,533,692	+		AO353_15990	0.22	-1.7
3,533,692	+		AO353_15990	0.22	-2.3
3,533,693	-		AO353_15990	0.22	-0.5
3,533,693	-		AO353_15990	0.22	-2.9
3,533,701	+		AO353_15990	0.23	-1.9
3,533,702	-		AO353_15990	0.23	-0.5
3,533,758	+		AO353_15990	0.28	-0.7
3,533,758	+		AO353_15990	0.28	-3.5
3,533,758	+		AO353_15990	0.28	-0.8
3,533,758	+		AO353_15990	0.28	-2.5
3,533,758	+		AO353_15990	0.28	-0.7
3,533,758	+		AO353_15990	0.28	-2.7
3,533,758	+		AO353_15990	0.28	-0.9
3,533,758	+		AO353_15990	0.28	-1.7
3,533,758	+		AO353_15990	0.28	-1.4
3,533,758	+		AO353_15990	0.28	-1.8
3,533,758	+		AO353_15990	0.28	-1.5
3,533,758	+		AO353_15990	0.28	-1.1
3,533,758	+		AO353_15990	0.28	-1.3
3,533,758	+		AO353_15990	0.28	+0.9
3,533,758	+		AO353_15990	0.28	-0.7
3,533,759	-		AO353_15990	0.28	-0.2
3,533,759	-		AO353_15990	0.28	-1.8
3,533,759	-		AO353_15990	0.28	-0.1
3,533,759	-		AO353_15990	0.28	-1.9
3,533,759	-		AO353_15990	0.28	-3.6
3,533,759	-		AO353_15990	0.28	-0.4
3,533,759	-		AO353_15990	0.28	-3.1
3,533,759	-		AO353_15990	0.28	-1.5
3,533,759	-		AO353_15990	0.28	-2.3
3,533,759	-		AO353_15990	0.28	-1.4
3,533,759	-		AO353_15990	0.28	-1.7
3,533,759	-		AO353_15990	0.28	-0.7
3,533,777	+		AO353_15990	0.29	-1.1
3,533,777	+		AO353_15990	0.29	-3.1
3,533,778	-		AO353_15990	0.29	-0.4
3,533,778	-		AO353_15990	0.29	-2.7
3,533,781	+		AO353_15990	0.30	-1.1
3,533,818	+		AO353_15990	0.33	-0.1
3,533,821	+		AO353_15990	0.33	-2.0
3,533,821	+		AO353_15990	0.33	-1.8
3,533,821	+		AO353_15990	0.33	-1.3
3,533,822	-		AO353_15990	0.33	-1.9
3,533,822	-		AO353_15990	0.33	-2.5
3,533,822	-		AO353_15990	0.33	-2.5
3,533,822	-		AO353_15990	0.33	-0.5
3,533,822	-		AO353_15990	0.33	-0.1
3,533,822	-		AO353_15990	0.33	-2.5
3,533,822	-		AO353_15990	0.33	-0.1
3,533,854	+		AO353_15990	0.36	-1.1
3,533,854	+		AO353_15990	0.36	-1.8
3,533,854	+		AO353_15990	0.36	+0.7
3,533,854	+		AO353_15990	0.36	-0.1
3,533,854	+		AO353_15990	0.36	-2.3
3,533,854	+		AO353_15990	0.36	-0.7
3,533,854	+		AO353_15990	0.36	+0.3
3,533,854	+		AO353_15990	0.36	-3.3
3,533,855	-		AO353_15990	0.36	-3.5
3,533,855	-		AO353_15990	0.36	-1.5
3,533,855	-		AO353_15990	0.36	-0.8
3,533,855	-		AO353_15990	0.36	-2.1
3,533,855	-		AO353_15990	0.36	-1.5
3,533,855	-		AO353_15990	0.36	-0.8
3,533,855	-		AO353_15990	0.36	-0.4
3,533,855	-		AO353_15990	0.36	-1.0
3,533,858	-		AO353_15990	0.36	-0.4
3,533,858	-		AO353_15990	0.36	+1.9
3,533,887	-		AO353_15990	0.38	-3.7
3,533,917	+		AO353_15990	0.41	-2.2
3,533,917	+		AO353_15990	0.41	-0.1
3,533,917	+		AO353_15990	0.41	-1.9
3,533,918	-		AO353_15990	0.41	-1.3
3,533,918	-		AO353_15990	0.41	-0.4
3,533,918	-		AO353_15990	0.41	-2.2
3,533,918	-		AO353_15990	0.41	-2.4
3,533,924	-		AO353_15990	0.41	-3.7
3,533,962	+		AO353_15990	0.44	-3.5
3,533,962	+		AO353_15990	0.44	-3.3
3,533,962	+		AO353_15990	0.44	-2.4
3,533,962	+		AO353_15990	0.44	-0.9
3,533,962	+		AO353_15990	0.44	-1.9
3,533,962	+		AO353_15990	0.44	-1.4
3,533,962	+		AO353_15990	0.44	-1.7
3,533,963	-		AO353_15990	0.44	-0.7
3,533,963	-		AO353_15990	0.44	-1.8
3,533,963	-		AO353_15990	0.44	-2.3
3,533,963	-		AO353_15990	0.44	-3.0
3,533,963	-		AO353_15990	0.44	-1.7
3,533,963	-		AO353_15990	0.44	-1.3
3,533,963	-		AO353_15990	0.44	-1.4
3,533,963	-		AO353_15990	0.44	-2.8
3,533,967	+		AO353_15990	0.45	-2.6
3,534,000	+		AO353_15990	0.47	-0.8
3,534,037	+		AO353_15990	0.50	-2.4
3,534,037	+		AO353_15990	0.50	-1.5
3,534,037	+		AO353_15990	0.50	+0.9
3,534,037	+		AO353_15990	0.50	-2.2
3,534,037	+		AO353_15990	0.50	+0.9
3,534,038	-		AO353_15990	0.51	-0.1
3,534,038	-		AO353_15990	0.51	-3.3
3,534,038	-		AO353_15990	0.51	-1.4
3,534,038	-		AO353_15990	0.51	-2.5
3,534,038	-		AO353_15990	0.51	-2.1
3,534,038	-		AO353_15990	0.51	-1.7
3,534,173	-		AO353_15990	0.62	-1.4
3,534,173	-		AO353_15990	0.62	-0.7
3,534,174	+		AO353_15990	0.62	-1.7
3,534,211	+		AO353_15990	0.65	-0.0
3,534,211	+		AO353_15990	0.65	-2.5
3,534,278	-		AO353_15990	0.70	-0.1
3,534,278	-		AO353_15990	0.70	-2.1
3,534,278	-		AO353_15990	0.70	-0.7
3,534,278	-		AO353_15990	0.70	-3.3