Experiment: Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_360 and Pf6N2E2_361 are separated by 43 nucleotides Pf6N2E2_361 and Pf6N2E2_362 are separated by 11 nucleotides Pf6N2E2_362 and Pf6N2E2_363 are separated by 1 nucleotides
Pf6N2E2_360 - ABC peptide transporter, periplasmic ligand binding protein, at 425,441 to 427,084
_360
Pf6N2E2_361 - Peptide ABC transporter, permease protein, at 427,128 to 428,084
_361
Pf6N2E2_362 - Dipeptide transport system permease protein dppC, at 428,096 to 428,956
_362
Pf6N2E2_363 - ATPase components of various ABC-type transport systems, contain duplicated ATPase, at 428,958 to 430,802
_363
Position (kb) 427
428
429 Strain fitness (log2 ratio) -1
0
1
2 at 426.172 kb on + strand, within Pf6N2E2_360 at 426.180 kb on - strand, within Pf6N2E2_360 at 426.180 kb on - strand, within Pf6N2E2_360 at 426.180 kb on - strand, within Pf6N2E2_360 at 426.201 kb on - strand, within Pf6N2E2_360 at 426.358 kb on + strand, within Pf6N2E2_360 at 426.358 kb on + strand, within Pf6N2E2_360 at 426.359 kb on - strand, within Pf6N2E2_360 at 426.362 kb on + strand, within Pf6N2E2_360 at 426.363 kb on - strand, within Pf6N2E2_360 at 426.363 kb on - strand, within Pf6N2E2_360 at 426.363 kb on - strand, within Pf6N2E2_360 at 426.363 kb on - strand, within Pf6N2E2_360 at 426.524 kb on + strand, within Pf6N2E2_360 at 426.524 kb on + strand, within Pf6N2E2_360 at 426.524 kb on + strand, within Pf6N2E2_360 at 426.525 kb on - strand, within Pf6N2E2_360 at 426.525 kb on - strand, within Pf6N2E2_360 at 426.551 kb on + strand, within Pf6N2E2_360 at 426.551 kb on + strand, within Pf6N2E2_360 at 426.551 kb on + strand, within Pf6N2E2_360 at 426.552 kb on - strand, within Pf6N2E2_360 at 426.552 kb on - strand, within Pf6N2E2_360 at 426.920 kb on + strand at 427.049 kb on + strand at 427.049 kb on + strand at 427.049 kb on + strand at 427.049 kb on + strand at 427.049 kb on + strand at 427.050 kb on - strand at 427.051 kb on + strand at 427.051 kb on + strand at 427.051 kb on + strand at 427.051 kb on + strand at 427.051 kb on + strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.052 kb on - strand at 427.133 kb on + strand at 427.134 kb on - strand at 427.195 kb on + strand at 427.676 kb on + strand, within Pf6N2E2_361 at 427.676 kb on + strand, within Pf6N2E2_361 at 427.677 kb on - strand, within Pf6N2E2_361 at 427.677 kb on - strand, within Pf6N2E2_361 at 427.681 kb on - strand, within Pf6N2E2_361 at 427.885 kb on - strand, within Pf6N2E2_361 at 428.624 kb on + strand, within Pf6N2E2_362 at 428.625 kb on - strand, within Pf6N2E2_362 at 428.625 kb on - strand, within Pf6N2E2_362 at 428.625 kb on - strand, within Pf6N2E2_362 at 428.625 kb on - strand at 428.625 kb on - strand, within Pf6N2E2_362 at 428.664 kb on - strand, within Pf6N2E2_362 at 428.942 kb on - strand at 428.942 kb on - strand at 428.957 kb on + strand at 428.958 kb on - strand at 428.958 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 500 mM remove 426,172 + Pf6N2E2_360 0.44 -0.3 426,180 - Pf6N2E2_360 0.45 +0.5 426,180 - Pf6N2E2_360 0.45 +0.3 426,180 - Pf6N2E2_360 0.45 -0.4 426,201 - Pf6N2E2_360 0.46 -1.2 426,358 + Pf6N2E2_360 0.56 +0.3 426,358 + Pf6N2E2_360 0.56 +0.5 426,359 - Pf6N2E2_360 0.56 +0.2 426,362 + Pf6N2E2_360 0.56 +0.1 426,363 - Pf6N2E2_360 0.56 +0.1 426,363 - Pf6N2E2_360 0.56 -0.8 426,363 - Pf6N2E2_360 0.56 +0.2 426,363 - Pf6N2E2_360 0.56 +0.4 426,524 + Pf6N2E2_360 0.66 +1.1 426,524 + Pf6N2E2_360 0.66 +0.6 426,524 + Pf6N2E2_360 0.66 -0.5 426,525 - Pf6N2E2_360 0.66 +1.5 426,525 - Pf6N2E2_360 0.66 -1.6 426,551 + Pf6N2E2_360 0.68 +0.1 426,551 + Pf6N2E2_360 0.68 +0.1 426,551 + Pf6N2E2_360 0.68 +0.5 426,552 - Pf6N2E2_360 0.68 +0.2 426,552 - Pf6N2E2_360 0.68 +1.3 426,920 + +0.6 427,049 + -0.2 427,049 + +0.4 427,049 + +0.2 427,049 + -0.4 427,049 + +1.0 427,050 - +0.2 427,051 + +0.1 427,051 + -0.6 427,051 + +1.2 427,051 + -0.4 427,051 + -0.0 427,052 - -0.1 427,052 - +0.2 427,052 - -0.0 427,052 - -0.5 427,052 - +0.6 427,052 - -0.1 427,052 - +0.6 427,052 - +0.8 427,133 + -0.0 427,134 - +0.2 427,195 + +0.4 427,676 + Pf6N2E2_361 0.57 -0.2 427,676 + Pf6N2E2_361 0.57 -1.2 427,677 - Pf6N2E2_361 0.57 +0.0 427,677 - Pf6N2E2_361 0.57 -1.5 427,681 - Pf6N2E2_361 0.58 -0.8 427,885 - Pf6N2E2_361 0.79 -0.3 428,624 + Pf6N2E2_362 0.61 -0.9 428,625 - Pf6N2E2_362 0.61 +1.8 428,625 - Pf6N2E2_362 0.61 +0.4 428,625 - Pf6N2E2_362 0.61 -0.4 428,625 - +1.8 428,625 - Pf6N2E2_362 0.61 +0.0 428,664 - Pf6N2E2_362 0.66 -0.2 428,942 - +0.5 428,942 - -0.5 428,957 + +0.2 428,958 - -0.3 428,958 - -0.3
Or see this region's nucleotide sequence