Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22440

Experiment: Temperature shift 30_to_21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 30_to_21
5,044,212	+				+0.5
5,044,212	+				+0.4
5,044,213	-				-0.7
5,044,213	-				+0.0
5,044,221	+				+0.5
5,044,221	+				+1.7
5,044,221	+				+0.4
5,044,222	-				-0.2
5,044,222	-				+0.3
5,044,222	-				+0.5
5,044,222	-				-0.7
5,044,266	+				+0.3
5,044,266	+				-1.0
5,044,266	+				-0.9
5,044,266	+				+1.8
5,044,266	+				+0.8
5,044,266	+				+0.0
5,044,266	+				-1.5
5,044,266	+				+0.2
5,044,266	+				-0.9
5,044,266	+				-1.3
5,044,266	+				-1.6
5,044,266	+				-1.0
5,044,267	-				+0.8
5,044,267	-				-0.1
5,044,267	-				-0.5
5,044,267	-				+1.8
5,044,267	-				-0.5
5,044,267	-				-0.4
5,044,267	-				-0.9
5,044,267	-				+1.0
5,044,267	-				+0.2
5,044,267	-				+0.9
5,044,289	+				+0.2
5,044,290	-				-1.9
5,044,401	+		PFLU_RS22435	0.18	+0.7
5,044,408	+		PFLU_RS22435	0.19	-1.1
5,044,408	+		PFLU_RS22435	0.19	+1.6
5,044,408	+		PFLU_RS22435	0.19	-0.3
5,044,409	-		PFLU_RS22435	0.19	-0.1
5,044,409	-		PFLU_RS22435	0.19	-2.2
5,044,409	-		PFLU_RS22435	0.19	-1.0
5,044,409	-		PFLU_RS22435	0.19	-0.2
5,044,409	-		PFLU_RS22435	0.19	+0.9
5,044,409	-		PFLU_RS22435	0.19	+0.2
5,044,409	-		PFLU_RS22435	0.19	+1.2
5,044,409	-		PFLU_RS22435	0.19	+0.8
5,044,409	-		PFLU_RS22435	0.19	-3.1
5,044,522	+		PFLU_RS22435	0.34	-1.2
5,044,522	+		PFLU_RS22435	0.34	-0.1
5,044,522	+		PFLU_RS22435	0.34	+0.1
5,044,522	+		PFLU_RS22435	0.34	+2.2
5,044,522	+		PFLU_RS22435	0.34	+0.3
5,044,522	+		PFLU_RS22435	0.34	+0.1
5,044,522	+		PFLU_RS22435	0.34	+0.4
5,044,522	+		PFLU_RS22435	0.34	+0.8
5,044,522	+		PFLU_RS22435	0.34	-1.0
5,044,523	-		PFLU_RS22435	0.34	+1.2
5,044,523	-		PFLU_RS22435	0.34	-0.3
5,044,523	-		PFLU_RS22435	0.34	+0.4
5,044,523	-		PFLU_RS22435	0.34	+0.0
5,044,523	-		PFLU_RS22435	0.34	-1.2
5,044,523	-		PFLU_RS22435	0.34	+0.5
5,044,523	-		PFLU_RS22435	0.34	+0.8
5,044,523	-		PFLU_RS22435	0.34	-1.4
5,044,523	-		PFLU_RS22435	0.34	+0.1
5,044,523	-		PFLU_RS22435	0.34	-0.4
5,044,523	-		PFLU_RS22435	0.34	+0.0
5,044,523	-		PFLU_RS22435	0.34	+0.4
5,044,523	-		PFLU_RS22435	0.34	-0.3
5,044,523	-		PFLU_RS22435	0.34	+0.4
5,044,523	-		PFLU_RS22435	0.34	+0.1
5,044,523	-		PFLU_RS22435	0.34	+1.6
5,044,561	+		PFLU_RS22435	0.39	+0.3
5,044,562	-		PFLU_RS22435	0.39	+1.0
5,044,562	-		PFLU_RS22435	0.39	-0.8
5,044,562	-		PFLU_RS22435	0.39	+0.6
5,044,678	+		PFLU_RS22435	0.55	+0.4
5,044,678	+		PFLU_RS22435	0.55	+0.4
5,044,678	+		PFLU_RS22435	0.55	+0.2
5,044,679	-		PFLU_RS22435	0.55	+0.7
5,044,809	-		PFLU_RS22435	0.72	-0.4
5,044,940	+		PFLU_RS22435	0.90	-1.7
5,044,940	+		PFLU_RS22435	0.90	-0.9
5,044,941	-		PFLU_RS22435	0.90	-1.2
5,044,941	-		PFLU_RS22435	0.90	+0.3
5,044,941	-		PFLU_RS22435	0.90	+0.4
5,044,941	-		PFLU_RS22435	0.90	+0.5
5,044,941	-		PFLU_RS22435	0.90	-0.0
5,044,987	+				-0.2
5,044,987	+				+0.0
5,044,987	+				-0.5
5,044,987	+				-0.3
5,044,988	-				+0.1
5,044,988	-				+0.5
5,044,988	-				+1.3
5,044,988	-				+0.6
5,044,988	-				-1.7
5,044,988	-				+0.1
5,045,028	+				-1.2
5,045,030	+				+0.8
5,045,030	+				+0.2
5,045,030	+				+0.4
5,045,030	+				-0.3
5,045,030	+				-0.1
5,045,030	+				-2.3
5,045,031	-				+0.3
5,045,031	-				+1.3
5,045,031	-				+0.2
5,045,031	-				-0.7
5,045,031	-				+0.7
5,045,054	+				+0.8
5,045,055	-				-0.1
5,045,088	+				-2.9
5,045,088	+				-0.1
5,045,088	+				+0.2
5,045,088	+				-0.0
5,045,089	-				-0.5
5,045,089	-				+0.1
5,045,089	-				+0.2
5,045,089	-				+1.3
5,045,100	+				-1.0
5,045,100	+				+0.0
5,045,100	+				+0.4
5,045,100	+				-0.7
5,045,100	+				+0.3
5,045,100	+				-0.7
5,045,100	+				-1.5
5,045,100	+				+0.5
5,045,100	+				+1.7
5,045,100	+				+0.5
5,045,101	-				-1.6
5,045,101	-				+0.4
5,045,101	-				+0.2
5,045,101	-				+0.5
5,045,133	+		PFLU_RS22440	0.17	+0.0
5,045,133	+		PFLU_RS22440	0.17	+1.8
5,045,133	+		PFLU_RS22440	0.17	+0.3
5,045,133	+		PFLU_RS22440	0.17	+1.4
5,045,133	+		PFLU_RS22440	0.17	+0.1
5,045,133	+		PFLU_RS22440	0.17	+0.5
5,045,133	+		PFLU_RS22440	0.17	+0.3
5,045,133	+		PFLU_RS22440	0.17	-0.1
5,045,133	+		PFLU_RS22440	0.17	-1.2
5,045,133	+		PFLU_RS22440	0.17	+0.9
5,045,133	+		PFLU_RS22440	0.17	-1.0
5,045,133	+		PFLU_RS22440	0.17	-1.2
5,045,133	+		PFLU_RS22440	0.17	+0.8
5,045,133	+		PFLU_RS22440	0.17	-1.6
5,045,133	+		PFLU_RS22440	0.17	+1.3
5,045,133	+		PFLU_RS22440	0.17	+1.4
5,045,133	+		PFLU_RS22440	0.17	-0.4
5,045,133	+		PFLU_RS22440	0.17	+0.2
5,045,133	+		PFLU_RS22440	0.17	+1.0
5,045,133	+		PFLU_RS22440	0.17	-1.7
5,045,133	+		PFLU_RS22440	0.17	+0.7
5,045,133	+		PFLU_RS22440	0.17	+0.0
5,045,133	+		PFLU_RS22440	0.17	-0.5
5,045,134	-		PFLU_RS22440	0.17	-0.5
5,045,134	-		PFLU_RS22440	0.17	+1.4
5,045,134	-		PFLU_RS22440	0.17	+0.4
5,045,134	-		PFLU_RS22440	0.17	-0.1
5,045,134	-		PFLU_RS22440	0.17	+1.2
5,045,134	-		PFLU_RS22440	0.17	-0.3
5,045,134	-		PFLU_RS22440	0.17	+1.0
5,045,134	-		PFLU_RS22440	0.17	+0.3
5,045,134	-		PFLU_RS22440	0.17	-0.5
5,045,134	-		PFLU_RS22440	0.17	-0.8
5,045,134	-		PFLU_RS22440	0.17	-0.5
5,045,134	-		PFLU_RS22440	0.17	-0.9
5,045,134	-		PFLU_RS22440	0.17	-0.5
5,045,134	-		PFLU_RS22440	0.17	+1.0
5,045,134	-		PFLU_RS22440	0.17	-1.6
5,045,134	-		PFLU_RS22440	0.17	+0.3
5,045,206	+		PFLU_RS22440	0.37	+0.4
5,045,207	-		PFLU_RS22440	0.37	-0.5
5,045,231	+		PFLU_RS22440	0.43	+0.6
5,045,236	+		PFLU_RS22440	0.45	+0.0
5,045,236	+		PFLU_RS22440	0.45	+0.4
5,045,237	-		PFLU_RS22440	0.45	-0.3
5,045,379	+				-2.0
5,045,379	+				+1.5
5,045,380	-				-0.2
5,045,380	-				-0.4
5,045,572	+		PFLU_RS22445	0.23	-1.1
5,045,572	+		PFLU_RS22445	0.23	+0.8
5,045,572	+		PFLU_RS22445	0.23	+0.3
5,045,572	+		PFLU_RS22445	0.23	+0.3
5,045,572	+		PFLU_RS22445	0.23	+0.1
5,045,572	+		PFLU_RS22445	0.23	+0.8
5,045,572	+		PFLU_RS22445	0.23	+1.8
5,045,572	+		PFLU_RS22445	0.23	+0.3
5,045,572	+		PFLU_RS22445	0.23	+0.4
5,045,572	+		PFLU_RS22445	0.23	+0.8
5,045,572	+		PFLU_RS22445	0.23	+0.6
5,045,572	+		PFLU_RS22445	0.23	-0.3
5,045,572	+		PFLU_RS22445	0.23	+1.1
5,045,572	+		PFLU_RS22445	0.23	+1.4
5,045,572	+		PFLU_RS22445	0.23	-1.6
5,045,572	+		PFLU_RS22445	0.23	-1.5
5,045,573	-		PFLU_RS22445	0.23	-0.5
5,045,573	-		PFLU_RS22445	0.23	+0.6
5,045,573	-		PFLU_RS22445	0.23	+0.7
5,045,573	-		PFLU_RS22445	0.23	-0.6
5,045,573	-		PFLU_RS22445	0.23	+2.8
5,045,573	-		PFLU_RS22445	0.23	+1.7
5,045,573	-		PFLU_RS22445	0.23	+1.3
5,045,573	-		PFLU_RS22445	0.23	-0.9
5,045,573	-		PFLU_RS22445	0.23	+0.8
5,045,573	-		PFLU_RS22445	0.23	+0.5
5,045,573	-		PFLU_RS22445	0.23	-0.7
5,045,573	-		PFLU_RS22445	0.23	-1.7
5,045,617	+		PFLU_RS22445	0.27	+0.4
5,045,617	+		PFLU_RS22445	0.27	-2.0
5,045,617	+		PFLU_RS22445	0.27	+0.9
5,045,617	+		PFLU_RS22445	0.27	-0.9
5,045,617	+		PFLU_RS22445	0.27	+0.5
5,045,617	+		PFLU_RS22445	0.27	+0.6
5,045,618	-		PFLU_RS22445	0.27	+0.5
5,045,618	-		PFLU_RS22445	0.27	+1.4
5,045,618	-		PFLU_RS22445	0.27	+0.3
5,045,618	-		PFLU_RS22445	0.27	-1.1
5,045,618	-		PFLU_RS22445	0.27	+0.4
5,045,618	-		PFLU_RS22445	0.27	-0.7
5,045,618	-		PFLU_RS22445	0.27	+0.0
5,045,618	-		PFLU_RS22445	0.27	+0.8
5,045,632	+		PFLU_RS22445	0.29	+0.4
5,045,632	+		PFLU_RS22445	0.29	-0.7
5,045,633	-		PFLU_RS22445	0.29	+0.2
5,045,667	+		PFLU_RS22445	0.33	-0.8
5,045,761	+		PFLU_RS22445	0.42	-1.0
5,045,761	+		PFLU_RS22445	0.42	+0.7
5,045,761	+		PFLU_RS22445	0.42	-0.5
5,045,761	+		PFLU_RS22445	0.42	-0.5
5,045,761	+		PFLU_RS22445	0.42	+0.1
5,045,761	+		PFLU_RS22445	0.42	-0.6
5,045,761	+		PFLU_RS22445	0.42	+0.1
5,045,761	+		PFLU_RS22445	0.42	+0.3
5,045,761	+		PFLU_RS22445	0.42	+0.7
5,045,761	+		PFLU_RS22445	0.42	+0.8
5,045,761	+		PFLU_RS22445	0.42	-0.6
5,045,761	+		PFLU_RS22445	0.42	-0.3
5,045,761	+		PFLU_RS22445	0.42	-0.2
5,045,761	+		PFLU_RS22445	0.42	-1.0
5,045,761	+		PFLU_RS22445	0.42	+1.0
5,045,761	+		PFLU_RS22445	0.42	-1.2
5,045,761	+		PFLU_RS22445	0.42	+0.4
5,045,761	+		PFLU_RS22445	0.42	+0.1
5,045,761	+		PFLU_RS22445	0.42	-0.3
5,045,761	+		PFLU_RS22445	0.42	-0.6
5,045,761	+		PFLU_RS22445	0.42	-1.7
5,045,761	+		PFLU_RS22445	0.42	+0.1
5,045,761	+		PFLU_RS22445	0.42	+0.4
5,045,761	+		PFLU_RS22445	0.42	+0.8
5,045,761	+		PFLU_RS22445	0.42	-0.4
5,045,761	+		PFLU_RS22445	0.42	-1.5
5,045,762	-		PFLU_RS22445	0.42	-3.9
5,045,762	-		PFLU_RS22445	0.42	+0.1
5,045,762	-		PFLU_RS22445	0.42	+0.5
5,045,762	-		PFLU_RS22445	0.42	+1.8
5,045,762	-		PFLU_RS22445	0.42	-0.6
5,045,762	-		PFLU_RS22445	0.42	+1.4
5,045,762	-		PFLU_RS22445	0.42	-0.7
5,045,762	-		PFLU_RS22445	0.42	-0.1
5,045,762	-		PFLU_RS22445	0.42	+1.2
5,045,762	-		PFLU_RS22445	0.42	+0.8
5,045,762	-		PFLU_RS22445	0.42	+0.0
5,045,762	-		PFLU_RS22445	0.42	+0.8
5,045,762	-		PFLU_RS22445	0.42	+0.8
5,045,762	-		PFLU_RS22445	0.42	-1.7
5,045,762	-		PFLU_RS22445	0.42	-0.7
5,045,762	-		PFLU_RS22445	0.42	+1.0
5,045,762	-		PFLU_RS22445	0.42	-0.3
5,045,762	-		PFLU_RS22445	0.42	-0.7
5,045,762	-		PFLU_RS22445	0.42	-0.7
5,045,762	-		PFLU_RS22445	0.42	-2.5
5,045,762	-		PFLU_RS22445	0.42	-1.7
5,045,762	-		PFLU_RS22445	0.42	+0.7
5,045,762	-		PFLU_RS22445	0.42	+0.8
5,045,762	-		PFLU_RS22445	0.42	-0.6
5,045,797	+		PFLU_RS22445	0.46	+0.8
5,045,798	-		PFLU_RS22445	0.46	+1.1
5,045,798	-		PFLU_RS22445	0.46	-0.2
5,045,798	-		PFLU_RS22445	0.46	+0.7
5,045,798	-		PFLU_RS22445	0.46	+0.5
5,045,798	-		PFLU_RS22445	0.46	+0.4
5,045,818	+		PFLU_RS22445	0.48	+0.4
5,045,818	+		PFLU_RS22445	0.48	+0.0
5,045,818	+		PFLU_RS22445	0.48	-0.3
5,045,818	+		PFLU_RS22445	0.48	+1.6
5,045,818	+		PFLU_RS22445	0.48	-1.5
5,045,818	+		PFLU_RS22445	0.48	-0.2
5,045,819	-		PFLU_RS22445	0.48	-1.2
5,045,819	-		PFLU_RS22445	0.48	+0.8
5,045,819	-		PFLU_RS22445	0.48	-1.3
5,045,819	-		PFLU_RS22445	0.48	+0.2
5,045,819	-		PFLU_RS22445	0.48	-2.1
5,045,819	-		PFLU_RS22445	0.48	-0.7
5,045,819	-		PFLU_RS22445	0.48	+0.8
5,045,985	+		PFLU_RS22445	0.66	+0.4
5,045,985	+		PFLU_RS22445	0.66	+1.1
5,045,985	+		PFLU_RS22445	0.66	+1.0
5,045,985	+		PFLU_RS22445	0.66	-0.5
5,045,985	+		PFLU_RS22445	0.66	+0.7
5,045,985	+		PFLU_RS22445	0.66	-0.7
5,045,985	+		PFLU_RS22445	0.66	-0.5
5,045,985	+		PFLU_RS22445	0.66	+0.2
5,045,985	+		PFLU_RS22445	0.66	+1.0
5,045,986	-		PFLU_RS22445	0.66	-1.2
5,045,986	-		PFLU_RS22445	0.66	-0.5
5,045,986	-		PFLU_RS22445	0.66	-1.5
5,045,986	-		PFLU_RS22445	0.66	+0.6
5,045,986	-		PFLU_RS22445	0.66	-0.2
5,045,986	-		PFLU_RS22445	0.66	-0.3
5,046,052	+		PFLU_RS22445	0.73	+0.5
5,046,052	+		PFLU_RS22445	0.73	+0.4
5,046,052	+		PFLU_RS22445	0.73	-0.7
5,046,053	-		PFLU_RS22445	0.73	+0.5
5,046,053	-		PFLU_RS22445	0.73	+0.5
5,046,214	+		PFLU_RS22445	0.89	-1.2
5,046,214	+		PFLU_RS22445	0.89	+0.2
5,046,214	+		PFLU_RS22445	0.89	+0.5
5,046,214	+		PFLU_RS22445	0.89	+0.3
5,046,214	+		PFLU_RS22445	0.89	+0.6
5,046,214	+		PFLU_RS22445	0.89	-0.5
5,046,214	+		PFLU_RS22445	0.89	-0.6
5,046,214	+		PFLU_RS22445	0.89	+0.0
5,046,215	-		PFLU_RS22445	0.90	-2.2
5,046,215	-		PFLU_RS22445	0.90	-0.2
5,046,215	-		PFLU_RS22445	0.90	-0.0
5,046,230	+				+0.8
5,046,231	-				-0.3
5,046,231	-				-0.6
5,046,250	+				+1.5
5,046,250	+				-0.7
5,046,251	-				-2.6
5,046,251	-				+0.1
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5,046,287	+				-0.7
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5,046,287	+				-2.2
5,046,287	+				-1.7
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5,046,288	-				+3.0
5,046,288	-				+0.8
5,046,288	-				+0.6
5,046,288	-				-0.7
5,046,288	-				+1.3
5,046,288	-				+0.5
5,046,308	+				+1.4
5,046,371	+				+0.7
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5,046,371	+				+0.0
5,046,371	+				-0.7
5,046,372	-				+1.2
5,046,372	-				+0.6
5,046,372	-				-0.6
5,046,372	-				+2.6
5,046,380	+				+0.5
5,046,381	-				+0.4
5,046,381	-				+0.4
5,046,381	-				-0.9
5,046,381	-				+1.1