Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03685 and AO353_03690 are separated by 174 nucleotides AO353_03690 and AO353_03695 are separated by 4 nucleotides AO353_03695 and AO353_03700 overlap by 4 nucleotides
AO353_03685: AO353_03685 - chemotaxis protein, at 787,628 to 789,517
_03685
AO353_03690: AO353_03690 - glycoside hydrolase, at 789,692 to 790,801
_03690
AO353_03695: AO353_03695 - deacetylase, at 790,806 to 791,570
_03695
AO353_03700: AO353_03700 - hypothetical protein, at 791,567 to 792,562
_03700
Position (kb) 789
790
791 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 789.502 kb on + strand at 789.502 kb on + strand at 789.503 kb on - strand at 789.503 kb on - strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.637 kb on + strand at 789.638 kb on - strand at 789.638 kb on - strand at 789.638 kb on - strand at 789.638 kb on - strand at 789.638 kb on - strand at 789.638 kb on - strand at 789.638 kb on - strand at 789.646 kb on + strand at 789.646 kb on + strand at 789.646 kb on + strand at 789.647 kb on - strand at 789.675 kb on + strand at 789.675 kb on + strand at 789.675 kb on + strand at 789.676 kb on - strand at 789.697 kb on + strand at 789.719 kb on + strand at 789.719 kb on + strand at 789.719 kb on + strand at 789.719 kb on + strand at 789.719 kb on + strand at 789.719 kb on + strand at 789.719 kb on + strand at 789.720 kb on - strand at 789.720 kb on - strand at 789.720 kb on - strand at 789.720 kb on - strand at 789.749 kb on + strand at 789.749 kb on + strand at 789.750 kb on - strand at 789.750 kb on - strand at 789.750 kb on - strand at 789.750 kb on - strand at 789.782 kb on - strand at 789.782 kb on - strand at 789.845 kb on + strand, within AO353_03690 at 789.845 kb on + strand, within AO353_03690 at 789.846 kb on - strand, within AO353_03690 at 789.846 kb on - strand, within AO353_03690 at 789.917 kb on - strand, within AO353_03690 at 789.917 kb on - strand, within AO353_03690 at 789.917 kb on - strand, within AO353_03690 at 789.948 kb on + strand, within AO353_03690 at 789.948 kb on + strand, within AO353_03690 at 789.949 kb on - strand, within AO353_03690 at 789.949 kb on - strand, within AO353_03690 at 789.949 kb on - strand, within AO353_03690 at 789.949 kb on - strand, within AO353_03690 at 789.965 kb on + strand, within AO353_03690 at 789.966 kb on - strand, within AO353_03690 at 790.028 kb on + strand, within AO353_03690 at 790.028 kb on + strand, within AO353_03690 at 790.028 kb on + strand, within AO353_03690 at 790.028 kb on + strand, within AO353_03690 at 790.028 kb on + strand, within AO353_03690 at 790.028 kb on + strand, within AO353_03690 at 790.029 kb on - strand, within AO353_03690 at 790.029 kb on - strand, within AO353_03690 at 790.029 kb on - strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.097 kb on + strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.098 kb on - strand, within AO353_03690 at 790.112 kb on + strand, within AO353_03690 at 790.113 kb on - strand, within AO353_03690 at 790.293 kb on + strand, within AO353_03690 at 790.294 kb on - strand, within AO353_03690 at 790.608 kb on + strand, within AO353_03690 at 790.608 kb on + strand, within AO353_03690 at 790.608 kb on + strand, within AO353_03690 at 790.609 kb on - strand, within AO353_03690 at 790.624 kb on + strand, within AO353_03690 at 790.624 kb on + strand, within AO353_03690 at 790.624 kb on + strand, within AO353_03690 at 790.624 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.672 kb on + strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.673 kb on - strand, within AO353_03690 at 790.689 kb on - strand, within AO353_03690 at 790.715 kb on + strand at 790.715 kb on + strand at 790.715 kb on + strand at 790.716 kb on - strand at 790.716 kb on - strand at 790.716 kb on - strand at 790.716 kb on - strand at 790.716 kb on - strand at 790.754 kb on + strand at 790.755 kb on - strand at 790.757 kb on + strand at 790.757 kb on + strand at 790.758 kb on - strand at 790.758 kb on - strand at 790.758 kb on - strand at 790.866 kb on + strand at 791.028 kb on + strand, within AO353_03695 at 791.031 kb on + strand, within AO353_03695 at 791.031 kb on + strand, within AO353_03695 at 791.031 kb on + strand, within AO353_03695 at 791.031 kb on + strand, within AO353_03695 at 791.031 kb on + strand, within AO353_03695 at 791.032 kb on - strand, within AO353_03695 at 791.032 kb on - strand, within AO353_03695 at 791.032 kb on - strand, within AO353_03695 at 791.032 kb on - strand, within AO353_03695 at 791.032 kb on - strand, within AO353_03695 at 791.032 kb on - strand at 791.092 kb on - strand, within AO353_03695 at 791.092 kb on - strand, within AO353_03695 at 791.092 kb on - strand, within AO353_03695 at 791.092 kb on - strand, within AO353_03695 at 791.092 kb on - strand, within AO353_03695 at 791.092 kb on - strand, within AO353_03695 at 791.112 kb on + strand, within AO353_03695 at 791.112 kb on + strand, within AO353_03695 at 791.113 kb on - strand, within AO353_03695 at 791.113 kb on - strand, within AO353_03695 at 791.113 kb on - strand, within AO353_03695 at 791.113 kb on - strand, within AO353_03695 at 791.113 kb on - strand, within AO353_03695 at 791.113 kb on - strand, within AO353_03695 at 791.262 kb on + strand, within AO353_03695 at 791.262 kb on + strand, within AO353_03695 at 791.262 kb on + strand, within AO353_03695 at 791.263 kb on - strand, within AO353_03695 at 791.263 kb on - strand, within AO353_03695 at 791.263 kb on - strand, within AO353_03695 at 791.428 kb on + strand, within AO353_03695 at 791.429 kb on - strand, within AO353_03695 at 791.429 kb on - strand, within AO353_03695 at 791.466 kb on + strand, within AO353_03695 at 791.466 kb on + strand, within AO353_03695 at 791.558 kb on + strand at 791.559 kb on - strand at 791.622 kb on + strand at 791.623 kb on - strand at 791.643 kb on + strand at 791.643 kb on + strand at 791.643 kb on + strand at 791.643 kb on + strand at 791.643 kb on + strand at 791.644 kb on - strand at 791.644 kb on - strand at 791.644 kb on - strand at 791.644 kb on - strand at 791.727 kb on + strand, within AO353_03700
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 789,502 + +0.1 789,502 + +0.8 789,503 - +0.8 789,503 - +0.5 789,637 + +0.2 789,637 + -0.5 789,637 + +0.0 789,637 + -0.3 789,637 + +0.0 789,637 + -0.1 789,637 + -0.9 789,637 + -1.3 789,637 + -1.5 789,637 + +0.9 789,637 + +1.5 789,637 + -1.7 789,637 + -1.1 789,637 + +0.9 789,637 + -0.5 789,637 + +0.8 789,637 + -0.5 789,637 + +1.5 789,637 + +0.5 789,637 + -0.1 789,637 + -0.4 789,638 - -0.2 789,638 - +1.9 789,638 - +0.2 789,638 - -0.2 789,638 - +0.2 789,638 - -0.4 789,638 - -0.3 789,646 + +0.7 789,646 + -0.0 789,646 + +0.6 789,647 - -1.5 789,675 + -0.4 789,675 + +1.5 789,675 + -0.3 789,676 - +1.8 789,697 + +0.9 789,719 + -0.9 789,719 + -0.1 789,719 + -0.1 789,719 + +0.8 789,719 + +1.1 789,719 + -0.3 789,719 + +0.3 789,720 - +0.5 789,720 - -0.7 789,720 - -0.2 789,720 - -1.1 789,749 + +0.7 789,749 + +0.7 789,750 - -0.5 789,750 - -0.7 789,750 - +0.9 789,750 - +0.5 789,782 - +0.2 789,782 - -1.9 789,845 + AO353_03690 0.14 +0.8 789,845 + AO353_03690 0.14 +0.7 789,846 - AO353_03690 0.14 -0.6 789,846 - AO353_03690 0.14 +0.9 789,917 - AO353_03690 0.20 -1.1 789,917 - AO353_03690 0.20 -1.3 789,917 - AO353_03690 0.20 -0.1 789,948 + AO353_03690 0.23 +0.0 789,948 + AO353_03690 0.23 +1.9 789,949 - AO353_03690 0.23 +0.4 789,949 - AO353_03690 0.23 +0.1 789,949 - AO353_03690 0.23 -0.4 789,949 - AO353_03690 0.23 -0.6 789,965 + AO353_03690 0.25 +0.0 789,966 - AO353_03690 0.25 -0.0 790,028 + AO353_03690 0.30 +1.5 790,028 + AO353_03690 0.30 -0.0 790,028 + AO353_03690 0.30 -0.3 790,028 + AO353_03690 0.30 +0.2 790,028 + AO353_03690 0.30 +0.0 790,028 + AO353_03690 0.30 -1.1 790,029 - AO353_03690 0.30 -0.6 790,029 - AO353_03690 0.30 -1.2 790,029 - AO353_03690 0.30 +0.1 790,097 + AO353_03690 0.36 +0.5 790,097 + AO353_03690 0.36 +1.5 790,097 + AO353_03690 0.36 -0.9 790,097 + AO353_03690 0.36 +0.3 790,097 + AO353_03690 0.36 -0.2 790,097 + AO353_03690 0.36 +2.5 790,097 + AO353_03690 0.36 +1.1 790,097 + AO353_03690 0.36 +0.5 790,097 + AO353_03690 0.36 +0.5 790,097 + AO353_03690 0.36 +0.3 790,098 - AO353_03690 0.37 -0.5 790,098 - AO353_03690 0.37 +0.6 790,098 - AO353_03690 0.37 +0.3 790,098 - AO353_03690 0.37 -1.3 790,098 - AO353_03690 0.37 +1.5 790,098 - AO353_03690 0.37 +0.2 790,098 - AO353_03690 0.37 +0.3 790,098 - AO353_03690 0.37 -0.6 790,098 - AO353_03690 0.37 +1.2 790,098 - AO353_03690 0.37 +1.3 790,098 - AO353_03690 0.37 +0.4 790,098 - AO353_03690 0.37 +0.2 790,112 + AO353_03690 0.38 +1.3 790,113 - AO353_03690 0.38 +0.9 790,293 + AO353_03690 0.54 -0.2 790,294 - AO353_03690 0.54 +1.3 790,608 + AO353_03690 0.83 +0.4 790,608 + AO353_03690 0.83 +1.3 790,608 + AO353_03690 0.83 +0.6 790,609 - AO353_03690 0.83 -0.1 790,624 + AO353_03690 0.84 -1.7 790,624 + AO353_03690 0.84 +0.2 790,624 + AO353_03690 0.84 -1.1 790,624 + AO353_03690 0.84 -0.3 790,672 + AO353_03690 0.88 +0.6 790,672 + AO353_03690 0.88 -1.7 790,672 + AO353_03690 0.88 -2.1 790,672 + AO353_03690 0.88 +0.1 790,672 + AO353_03690 0.88 +0.0 790,672 + AO353_03690 0.88 +1.1 790,672 + AO353_03690 0.88 +3.0 790,673 - AO353_03690 0.88 -0.5 790,673 - AO353_03690 0.88 +1.1 790,673 - AO353_03690 0.88 +0.1 790,673 - AO353_03690 0.88 +0.6 790,673 - AO353_03690 0.88 -0.4 790,673 - AO353_03690 0.88 +1.5 790,673 - AO353_03690 0.88 +0.1 790,673 - AO353_03690 0.88 +0.1 790,689 - AO353_03690 0.90 +1.2 790,715 + -0.5 790,715 + -0.8 790,715 + -1.2 790,716 - +0.1 790,716 - +0.1 790,716 - -2.2 790,716 - -0.6 790,716 - +0.0 790,754 + +1.0 790,755 - -0.5 790,757 + +1.0 790,757 + +0.9 790,758 - -0.4 790,758 - -0.5 790,758 - +0.9 790,866 + -1.1 791,028 + AO353_03695 0.29 +0.3 791,031 + AO353_03695 0.29 -0.2 791,031 + AO353_03695 0.29 -0.5 791,031 + AO353_03695 0.29 +2.0 791,031 + AO353_03695 0.29 -0.4 791,031 + AO353_03695 0.29 -0.0 791,032 - AO353_03695 0.30 +0.2 791,032 - AO353_03695 0.30 +2.5 791,032 - AO353_03695 0.30 +0.3 791,032 - AO353_03695 0.30 -0.3 791,032 - AO353_03695 0.30 -1.0 791,032 - +1.5 791,092 - AO353_03695 0.37 +0.3 791,092 - AO353_03695 0.37 -0.7 791,092 - AO353_03695 0.37 +0.5 791,092 - AO353_03695 0.37 -0.5 791,092 - AO353_03695 0.37 -1.5 791,092 - AO353_03695 0.37 +0.2 791,112 + AO353_03695 0.40 -0.2 791,112 + AO353_03695 0.40 -1.9 791,113 - AO353_03695 0.40 -0.3 791,113 - AO353_03695 0.40 -0.1 791,113 - AO353_03695 0.40 +0.2 791,113 - AO353_03695 0.40 -0.1 791,113 - AO353_03695 0.40 -1.6 791,113 - AO353_03695 0.40 -0.1 791,262 + AO353_03695 0.60 +1.1 791,262 + AO353_03695 0.60 +0.8 791,262 + AO353_03695 0.60 +0.3 791,263 - AO353_03695 0.60 -0.5 791,263 - AO353_03695 0.60 +0.6 791,263 - AO353_03695 0.60 -0.0 791,428 + AO353_03695 0.81 +0.2 791,429 - AO353_03695 0.81 -0.5 791,429 - AO353_03695 0.81 +0.5 791,466 + AO353_03695 0.86 +0.1 791,466 + AO353_03695 0.86 +1.5 791,558 + -0.3 791,559 - -0.3 791,622 + +0.7 791,623 - -0.3 791,643 + -0.5 791,643 + +0.3 791,643 + -2.0 791,643 + +1.5 791,643 + -0.9 791,644 - -0.5 791,644 - -0.3 791,644 - +0.8 791,644 - -2.2 791,727 + AO353_03700 0.16 +1.9
Or see this region's nucleotide sequence