Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS14800

Experiment: R2A with arsenate 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 15.625 mM
3,272,053	+		LRK54_RS14790	0.56	-1.2
3,272,053	+		LRK54_RS14790	0.56	-0.1
3,272,053	+		LRK54_RS14790	0.56	-0.5
3,272,053	+		LRK54_RS14790	0.56	-0.0
3,272,053	+		LRK54_RS14790	0.56	-0.8
3,272,054	-		LRK54_RS14790	0.56	-0.3
3,272,054	-		LRK54_RS14790	0.56	+1.3
3,272,054	-		LRK54_RS14790	0.56	+0.6
3,272,054	-		LRK54_RS14790	0.56	-1.0
3,272,054	-		LRK54_RS14790	0.56	+0.6
3,272,531	+				+0.9
3,272,531	+				-0.8
3,272,531	+				+0.2
3,272,531	+				+0.2
3,272,532	-				+1.9
3,272,532	-				-0.3
3,272,532	-				-0.8
3,272,600	+				-0.2
3,272,600	+				+0.0
3,272,601	-				+0.6
3,272,621	+				+0.5
3,272,621	+				-0.8
3,272,622	-		LRK54_RS14795	0.10	-0.4
3,272,622	-		LRK54_RS14795	0.10	+0.9
3,272,622	-		LRK54_RS14795	0.10	-0.4
3,272,622	-		LRK54_RS14795	0.10	-1.2
3,272,622	-		LRK54_RS14795	0.10	-1.2
3,272,622	-		LRK54_RS14795	0.10	+0.4
3,272,622	-		LRK54_RS14795	0.10	-1.6
3,272,622	-		LRK54_RS14795	0.10	-0.4
3,272,622	-		LRK54_RS14795	0.10	-0.3
3,272,622	-		LRK54_RS14795	0.10	-1.1
3,272,622	-		LRK54_RS14795	0.10	-0.8
3,272,630	+		LRK54_RS14795	0.13	-0.3
3,272,630	+		LRK54_RS14795	0.13	+0.1
3,272,630	+		LRK54_RS14795	0.13	+0.6
3,272,630	+		LRK54_RS14795	0.13	-0.8
3,272,630	+		LRK54_RS14795	0.13	-0.8
3,272,630	+		LRK54_RS14795	0.13	+0.1
3,272,630	+		LRK54_RS14795	0.13	-0.8
3,272,630	+		LRK54_RS14795	0.13	-0.2
3,272,630	+		LRK54_RS14795	0.13	+0.6
3,272,630	+		LRK54_RS14795	0.13	+1.5
3,272,630	+		LRK54_RS14795	0.13	+0.3
3,272,630	+		LRK54_RS14795	0.13	-1.2
3,272,630	+		LRK54_RS14795	0.13	+0.1
3,272,630	+		LRK54_RS14795	0.13	+0.3
3,272,631	-		LRK54_RS14795	0.13	-0.0
3,272,631	-		LRK54_RS14795	0.13	-0.3
3,272,631	-		LRK54_RS14795	0.13	-0.4
3,272,631	-		LRK54_RS14795	0.13	-0.1
3,272,631	-		LRK54_RS14795	0.13	+1.9
3,272,631	-		LRK54_RS14795	0.13	+0.9
3,272,631	-		LRK54_RS14795	0.13	+0.7
3,272,763	-		LRK54_RS14795	0.57	+0.3
3,272,812	+		LRK54_RS14795	0.73	+0.4
3,272,812	+		LRK54_RS14795	0.73	+0.6
3,272,812	+		LRK54_RS14795	0.73	-1.7
3,272,813	-		LRK54_RS14795	0.73	-0.8
3,272,831	+		LRK54_RS14795	0.79	-0.5
3,272,831	+		LRK54_RS14795	0.79	-0.4
3,272,831	+		LRK54_RS14795	0.79	+0.5
3,272,831	+		LRK54_RS14795	0.79	-0.8
3,272,831	+		LRK54_RS14795	0.79	-0.7
3,272,831	+		LRK54_RS14795	0.79	+0.5
3,272,831	+		LRK54_RS14795	0.79	+0.4
3,272,831	+		LRK54_RS14795	0.79	+0.7
3,272,831	+		LRK54_RS14795	0.79	-0.2
3,272,831	+		LRK54_RS14795	0.79	+0.2
3,272,831	+		LRK54_RS14795	0.79	-0.1
3,272,831	+		LRK54_RS14795	0.79	+0.3
3,272,831	+		LRK54_RS14795	0.79	-1.6
3,272,831	+		LRK54_RS14795	0.79	-0.8
3,272,831	+		LRK54_RS14795	0.79	-0.8
3,272,831	+		LRK54_RS14795	0.79	+0.4
3,272,831	+		LRK54_RS14795	0.79	+0.6
3,272,831	+		LRK54_RS14795	0.79	+0.4
3,272,832	-		LRK54_RS14795	0.80	-0.6
3,272,832	-		LRK54_RS14795	0.80	-0.8
3,272,832	-		LRK54_RS14795	0.80	-0.8
3,272,832	-		LRK54_RS14795	0.80	+1.1
3,272,832	-		LRK54_RS14795	0.80	+0.1
3,272,832	-		LRK54_RS14795	0.80	+0.4
3,272,832	-		LRK54_RS14795	0.80	+0.8
3,272,832	-		LRK54_RS14795	0.80	-1.6
3,272,832	-		LRK54_RS14795	0.80	+1.4
3,272,832	-		LRK54_RS14795	0.80	-0.5
3,272,832	-		LRK54_RS14795	0.80	-3.4
3,272,832	-		LRK54_RS14795	0.80	+0.0
3,272,832	-		LRK54_RS14795	0.80	-0.6
3,272,832	-		LRK54_RS14795	0.80	+0.9
3,272,832	-		LRK54_RS14795	0.80	-0.7
3,272,832	-		LRK54_RS14795	0.80	+2.1
3,272,858	+		LRK54_RS14795	0.88	+0.4
3,272,858	+		LRK54_RS14795	0.88	+1.2
3,272,858	+		LRK54_RS14795	0.88	+0.7
3,272,858	+		LRK54_RS14795	0.88	-0.5
3,272,858	+		LRK54_RS14795	0.88	+0.2
3,272,858	+		LRK54_RS14795	0.88	+0.5
3,272,858	+		LRK54_RS14795	0.88	+0.1
3,272,858	+		LRK54_RS14795	0.88	-1.5
3,272,858	+		LRK54_RS14795	0.88	+0.2
3,272,858	+		LRK54_RS14795	0.88	-1.2
3,272,858	+		LRK54_RS14795	0.88	-0.4
3,272,858	+		LRK54_RS14795	0.88	-0.3
3,272,858	+		LRK54_RS14795	0.88	-0.0
3,272,858	+		LRK54_RS14795	0.88	-0.7
3,272,858	+		LRK54_RS14795	0.88	-1.3
3,272,858	+		LRK54_RS14795	0.88	-0.8
3,272,858	+		LRK54_RS14795	0.88	+0.0
3,272,858	+		LRK54_RS14795	0.88	-0.4
3,272,858	+		LRK54_RS14795	0.88	+1.5
3,272,858	+		LRK54_RS14795	0.88	-0.5
3,272,858	+		LRK54_RS14795	0.88	+0.1
3,272,858	+		LRK54_RS14795	0.88	-0.1
3,272,858	+		LRK54_RS14795	0.88	-0.1
3,272,859	-		LRK54_RS14795	0.88	+0.4
3,272,859	-		LRK54_RS14795	0.88	-0.5
3,272,859	-		LRK54_RS14795	0.88	-0.4
3,272,859	-		LRK54_RS14795	0.88	-1.8
3,272,859	-		LRK54_RS14795	0.88	-2.0
3,272,859	-		LRK54_RS14795	0.88	+1.9
3,272,859	-		LRK54_RS14795	0.88	-0.0
3,272,859	-		LRK54_RS14795	0.88	+0.9
3,272,859	-		LRK54_RS14795	0.88	-2.2
3,272,859	-		LRK54_RS14795	0.88	-0.4
3,272,859	-		LRK54_RS14795	0.88	-1.2
3,272,859	-		LRK54_RS14795	0.88	+1.8
3,272,859	-		LRK54_RS14795	0.88	-0.2
3,272,859	-		LRK54_RS14795	0.88	-0.6
3,272,859	-		LRK54_RS14795	0.88	+1.3
3,272,859	-		LRK54_RS14795	0.88	+0.6
3,272,958	+				-0.7
3,272,958	+				+0.7
3,272,958	+				-0.6
3,272,959	-				-0.8
3,273,219	+		LRK54_RS14800	0.69	-0.1
3,273,220	-		LRK54_RS14800	0.69	-1.9
3,273,344	+				-0.1
3,273,345	-				-1.4
3,273,345	-				-0.3
3,273,345	-				-0.4
3,273,345	-				-0.1
3,273,412	+				+0.1
3,273,412	+				-0.1
3,273,412	+				-0.4
3,273,412	+				-0.4
3,273,412	+				-1.4
3,273,412	+				+0.9
3,273,412	+				+0.2
3,273,412	+				+0.9
3,273,412	+				-0.1
3,273,412	+				+0.1
3,273,413	-				+0.9
3,273,413	-				+0.6
3,273,413	-				-0.2
3,273,521	+				-0.8
3,273,521	+				+0.1
3,273,521	+				+1.2
3,273,521	+				-0.3
3,273,521	+				+0.0
3,273,522	-				+0.3
3,273,522	-				+0.1
3,273,522	-				+0.1
3,273,828	-		LRK54_RS14805	0.46	-1.5
3,273,828	-		LRK54_RS14805	0.46	-0.2
3,273,828	-		LRK54_RS14805	0.46	-0.7
3,274,055	+		LRK54_RS14805	0.75	+0.6
3,274,055	+		LRK54_RS14805	0.75	+0.9
3,274,055	+		LRK54_RS14805	0.75	+1.4
3,274,055	+		LRK54_RS14805	0.75	-0.4
3,274,055	+		LRK54_RS14805	0.75	+0.4
3,274,055	+		LRK54_RS14805	0.75	+0.3
3,274,055	+		LRK54_RS14805	0.75	+0.2
3,274,055	+		LRK54_RS14805	0.75	+0.4
3,274,055	+		LRK54_RS14805	0.75	+0.4
3,274,055	+		LRK54_RS14805	0.75	+0.4
3,274,055	+		LRK54_RS14805	0.75	-0.2
3,274,056	-		LRK54_RS14805	0.75	-0.8
3,274,076	+		LRK54_RS14805	0.78	+0.9
3,274,076	+		LRK54_RS14805	0.78	+0.1
3,274,076	+		LRK54_RS14805	0.78	-1.3
3,274,076	+		LRK54_RS14805	0.78	+1.2
3,274,076	+		LRK54_RS14805	0.78	-0.9
3,274,076	+		LRK54_RS14805	0.78	-0.8
3,274,076	+		LRK54_RS14805	0.78	+0.1
3,274,076	+		LRK54_RS14805	0.78	-1.0
3,274,077	-		LRK54_RS14805	0.78	+0.6
3,274,077	-		LRK54_RS14805	0.78	+0.8
3,274,077	-		LRK54_RS14805	0.78	+0.3
3,274,077	-		LRK54_RS14805	0.78	+1.6
3,274,077	-		LRK54_RS14805	0.78	-1.5
3,274,077	-		LRK54_RS14805	0.78	+0.8
3,274,077	-		LRK54_RS14805	0.78	+1.4
3,274,097	+		LRK54_RS14805	0.80	+0.4
3,274,098	-		LRK54_RS14805	0.80	-0.1