Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12595

Experiment: R2A with arsenate 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 15.625 mM
2,810,146	+		LRK54_RS12590	0.67	+0.3
2,810,146	+		LRK54_RS12590	0.67	-0.1
2,810,147	-		LRK54_RS12590	0.67	+0.5
2,810,147	-		LRK54_RS12590	0.67	-0.4
2,810,214	+		LRK54_RS12590	0.70	-0.7
2,810,214	+		LRK54_RS12590	0.70	-1.3
2,810,215	-		LRK54_RS12590	0.70	-1.7
2,810,215	-		LRK54_RS12590	0.70	+0.5
2,810,215	-		LRK54_RS12590	0.70	+0.5
2,810,215	-		LRK54_RS12590	0.70	+0.6
2,810,215	-		LRK54_RS12590	0.70	+0.1
2,810,215	-		LRK54_RS12590	0.70	-0.5
2,810,215	-		LRK54_RS12590	0.70	-1.1
2,810,217	+		LRK54_RS12590	0.70	+0.5
2,810,217	+		LRK54_RS12590	0.70	+0.5
2,810,217	+		LRK54_RS12590	0.70	-2.9
2,810,217	+		LRK54_RS12590	0.70	-1.5
2,810,217	+		LRK54_RS12590	0.70	+0.2
2,810,217	+		LRK54_RS12590	0.70	+0.6
2,810,218	-		LRK54_RS12590	0.70	-0.4
2,810,218	-		LRK54_RS12590	0.70	-0.4
2,810,218	-		LRK54_RS12590	0.70	+0.1
2,810,218	-		LRK54_RS12590	0.70	-0.1
2,810,218	-		LRK54_RS12590	0.70	+0.5
2,810,232	+		LRK54_RS12590	0.71	-0.6
2,810,232	+		LRK54_RS12590	0.71	-1.2
2,810,232	+		LRK54_RS12590	0.71	+1.2
2,810,232	+		LRK54_RS12590	0.71	-1.4
2,810,233	-		LRK54_RS12590	0.71	-1.2
2,810,233	-		LRK54_RS12590	0.71	-0.6
2,810,233	-		LRK54_RS12590	0.71	+0.1
2,810,298	+		LRK54_RS12590	0.73	+0.1
2,810,408	-		LRK54_RS12590	0.78	-0.3
2,810,556	+		LRK54_RS12590	0.85	-0.4
2,810,556	+		LRK54_RS12590	0.85	-2.7
2,810,556	+		LRK54_RS12590	0.85	-0.9
2,810,556	+		LRK54_RS12590	0.85	+0.1
2,810,556	+		LRK54_RS12590	0.85	+0.6
2,810,556	+		LRK54_RS12590	0.85	+0.1
2,810,557	-		LRK54_RS12590	0.85	+1.0
2,810,557	-		LRK54_RS12590	0.85	+0.4
2,810,557	-		LRK54_RS12590	0.85	-1.7
2,810,557	-		LRK54_RS12590	0.85	-0.7
2,810,557	-		LRK54_RS12590	0.85	-0.3
2,810,557	-		LRK54_RS12590	0.85	+0.7
2,810,557	-		LRK54_RS12590	0.85	-1.1
2,810,557	-		LRK54_RS12590	0.85	-1.1
2,810,557	-		LRK54_RS12590	0.85	+1.3
2,810,557	-		LRK54_RS12590	0.85	-1.0
2,810,557	-		LRK54_RS12590	0.85	+0.6
2,810,557	-		LRK54_RS12590	0.85	-0.9
2,810,739	+				+0.9
2,810,739	+				-1.1
2,810,739	+				+0.4
2,810,739	+				-1.9
2,810,739	+				-1.1
2,810,739	+				-0.3
2,810,739	+				-1.6
2,810,739	+				+0.3
2,810,740	-				-0.4
2,810,740	-				-1.0
2,810,740	-				-0.7
2,810,740	-				+0.1
2,810,740	-				-1.0
2,810,740	-				-0.4
2,810,740	-				-0.1
2,810,740	-				+0.9
2,810,754	+				-0.4
2,810,754	+				+0.3
2,810,754	+				-0.7
2,810,754	+				+0.6
2,810,755	-				-0.7
2,810,755	-				+1.9
2,810,755	-				-0.7
2,810,755	-				-0.4
2,810,755	-				-0.7
2,810,755	-				-2.0
2,810,755	-				-0.7
2,810,755	-				-0.6
2,811,059	+		LRK54_RS12595	0.31	-1.6
2,811,059	+		LRK54_RS12595	0.31	-0.7
2,811,251	+		LRK54_RS12595	0.67	-1.1
2,811,251	+		LRK54_RS12595	0.67	+1.4
2,811,251	+		LRK54_RS12595	0.67	-1.6
2,811,251	+		LRK54_RS12595	0.67	-0.9
2,811,251	+		LRK54_RS12595	0.67	+1.4
2,811,251	+		LRK54_RS12595	0.67	-0.3
2,811,252	-		LRK54_RS12595	0.67	-0.4
2,811,252	-		LRK54_RS12595	0.67	-1.6
2,811,252	-		LRK54_RS12595	0.67	-1.4
2,811,252	-		LRK54_RS12595	0.67	+0.4
2,811,252	-		LRK54_RS12595	0.67	-0.1
2,811,252	-		LRK54_RS12595	0.67	+0.6
2,811,252	-		LRK54_RS12595	0.67	-0.6
2,811,252	-		LRK54_RS12595	0.67	+0.6
2,811,252	-		LRK54_RS12595	0.67	+2.4
2,811,287	+		LRK54_RS12595	0.73	-0.3
2,811,287	+		LRK54_RS12595	0.73	-2.5
2,811,287	+		LRK54_RS12595	0.73	-2.6
2,811,287	+		LRK54_RS12595	0.73	-0.4
2,811,288	-		LRK54_RS12595	0.74	-0.1
2,811,288	-		LRK54_RS12595	0.74	-0.7
2,811,288	-		LRK54_RS12595	0.74	+0.1
2,811,288	-		LRK54_RS12595	0.74	-0.1
2,811,288	-		LRK54_RS12595	0.74	+0.9
2,811,482	+				+0.4
2,811,521	+				-1.3
2,811,521	+				-1.5
2,811,521	+				-2.6
2,811,521	+				-0.7
2,811,743	+		LRK54_RS12600	0.19	-2.4
2,811,743	+		LRK54_RS12600	0.19	-2.4
2,811,743	+		LRK54_RS12600	0.19	-1.0
2,811,743	+		LRK54_RS12600	0.19	-1.7
2,811,743	+		LRK54_RS12600	0.19	-1.7
2,811,743	+		LRK54_RS12600	0.19	-0.5
2,811,743	+		LRK54_RS12600	0.19	-0.4
2,811,743	+		LRK54_RS12600	0.19	-1.5
2,811,743	+		LRK54_RS12600	0.19	-1.1
2,811,744	-		LRK54_RS12600	0.19	-1.9
2,811,744	-		LRK54_RS12600	0.19	-0.7
2,811,744	-		LRK54_RS12600	0.19	-0.4
2,811,744	-		LRK54_RS12600	0.19	-3.4
2,811,744	-		LRK54_RS12600	0.19	-1.0
2,811,761	+		LRK54_RS12600	0.20	+0.4
2,811,761	+		LRK54_RS12600	0.20	+0.1
2,811,761	+		LRK54_RS12600	0.20	-0.6
2,811,761	+		LRK54_RS12600	0.20	-2.0
2,811,761	+		LRK54_RS12600	0.20	-0.6
2,811,761	+		LRK54_RS12600	0.20	-1.6
2,811,761	+		LRK54_RS12600	0.20	+0.9
2,811,761	+		LRK54_RS12600	0.20	-1.9
2,811,761	+		LRK54_RS12600	0.20	+0.9
2,811,761	+		LRK54_RS12600	0.20	-3.1
2,811,761	+		LRK54_RS12600	0.20	-0.7
2,811,761	+		LRK54_RS12600	0.20	-1.1
2,811,761	+		LRK54_RS12600	0.20	-1.5
2,811,761	+		LRK54_RS12600	0.20	-2.0
2,811,761	+		LRK54_RS12600	0.20	-2.1
2,811,761	+		LRK54_RS12600	0.20	-1.8
2,811,761	+		LRK54_RS12600	0.20	-3.0
2,811,761	+		LRK54_RS12600	0.20	-2.3
2,811,761	+		LRK54_RS12600	0.20	-0.9
2,811,761	+		LRK54_RS12600	0.20	+0.6
2,811,761	+		LRK54_RS12600	0.20	-1.5
2,811,761	+		LRK54_RS12600	0.20	-1.1
2,811,762	-		LRK54_RS12600	0.21	-0.7
2,811,762	-		LRK54_RS12600	0.21	-1.0
2,811,762	-		LRK54_RS12600	0.21	-1.0
2,811,762	-		LRK54_RS12600	0.21	-1.8
2,811,762	-		LRK54_RS12600	0.21	-0.1
2,811,762	-		LRK54_RS12600	0.21	-1.2
2,811,762	-		LRK54_RS12600	0.21	-0.8
2,811,762	-		LRK54_RS12600	0.21	-0.6
2,811,762	-		LRK54_RS12600	0.21	-3.2
2,811,762	-		LRK54_RS12600	0.21	-0.0
2,811,762	-		LRK54_RS12600	0.21	-0.4
2,811,762	-		LRK54_RS12600	0.21	-2.3
2,811,762	-		LRK54_RS12600	0.21	-2.0
2,811,762	-		LRK54_RS12600	0.21	-1.6
2,811,762	-		LRK54_RS12600	0.21	-1.8
2,812,055	+		LRK54_RS12600	0.42	-0.5
2,812,055	+		LRK54_RS12600	0.42	-1.1
2,812,056	-		LRK54_RS12600	0.42	-0.9
2,812,056	-		LRK54_RS12600	0.42	+0.6
2,812,056	-		LRK54_RS12600	0.42	-2.1
2,812,076	+		LRK54_RS12600	0.43	-1.4
2,812,076	+		LRK54_RS12600	0.43	-3.9
2,812,076	+		LRK54_RS12600	0.43	-2.1
2,812,166	+		LRK54_RS12600	0.50	-2.0
2,812,166	+		LRK54_RS12600	0.50	-2.3
2,812,166	+		LRK54_RS12600	0.50	-2.4
2,812,166	+		LRK54_RS12600	0.50	-1.4
2,812,166	+		LRK54_RS12600	0.50	-2.1
2,812,167	-		LRK54_RS12600	0.50	-1.5
2,812,167	-		LRK54_RS12600	0.50	+0.1
2,812,167	-		LRK54_RS12600	0.50	-1.6
2,812,167	-		LRK54_RS12600	0.50	-2.9
2,812,167	-		LRK54_RS12600	0.50	-0.7
2,812,167	-		LRK54_RS12600	0.50	-2.3
2,812,167	-		LRK54_RS12600	0.50	+0.3
2,812,167	-		LRK54_RS12600	0.50	-1.1
2,812,167	-		LRK54_RS12600	0.50	-1.0
2,812,167	-		LRK54_RS12600	0.50	-3.2
2,812,167	-		LRK54_RS12600	0.50	-1.9
2,812,181	+		LRK54_RS12600	0.51	-1.1
2,812,182	-		LRK54_RS12600	0.51	+0.9
2,812,182	-		LRK54_RS12600	0.51	-2.9