Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10865

Experiment: R2A with arsenate 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 15.625 mM
2,401,575	+				+1.3
2,401,576	-				-0.3
2,401,576	-				+1.3
2,401,658	+				+0.8
2,401,658	+				+0.3
2,401,658	+				+0.0
2,401,658	+				-0.9
2,401,658	+				+0.2
2,401,658	+				+0.6
2,401,658	+				+0.9
2,401,658	+				-0.3
2,401,658	+				+0.8
2,401,658	+				+0.1
2,401,658	+				+1.6
2,401,659	-				-2.3
2,401,659	-				-1.1
2,401,659	-				-0.0
2,401,659	-				+0.5
2,401,659	-				-1.9
2,401,659	-				+1.7
2,401,659	-				+0.3
2,401,659	-				-0.6
2,401,659	-				-1.4
2,401,659	-				+0.0
2,401,659	-				-3.3
2,401,659	-				-0.7
2,401,659	-				-0.8
2,401,920	+				-0.8
2,402,040	+		LRK54_RS10865	0.11	-2.6
2,402,040	+		LRK54_RS10865	0.11	-1.7
2,402,040	+		LRK54_RS10865	0.11	+0.3
2,402,040	+		LRK54_RS10865	0.11	-0.8
2,402,040	+		LRK54_RS10865	0.11	-0.8
2,402,040	+		LRK54_RS10865	0.11	-1.0
2,402,040	+		LRK54_RS10865	0.11	-2.2
2,402,041	-		LRK54_RS10865	0.11	-0.6
2,402,041	-		LRK54_RS10865	0.11	-0.3
2,402,041	-		LRK54_RS10865	0.11	-1.5
2,402,041	-		LRK54_RS10865	0.11	-1.6
2,402,041	-		LRK54_RS10865	0.11	-1.9
2,402,041	-		LRK54_RS10865	0.11	-1.8
2,402,514	+		LRK54_RS10865	0.27	-2.5
2,402,514	+		LRK54_RS10865	0.27	-0.3
2,402,514	+		LRK54_RS10865	0.27	-0.1
2,402,514	+		LRK54_RS10865	0.27	-3.5
2,402,514	+		LRK54_RS10865	0.27	+0.3
2,402,514	+		LRK54_RS10865	0.27	-0.4
2,402,535	+		LRK54_RS10865	0.28	-1.0
2,402,535	+		LRK54_RS10865	0.28	-0.7
2,402,536	-		LRK54_RS10865	0.28	-2.8
2,402,536	-		LRK54_RS10865	0.28	-0.8
2,402,536	-		LRK54_RS10865	0.28	+0.7
2,402,536	-		LRK54_RS10865	0.28	-1.3
2,402,685	-		LRK54_RS10865	0.33	-1.1
2,402,754	+		LRK54_RS10865	0.35	-0.5
2,402,755	-		LRK54_RS10865	0.35	-1.9
2,402,838	+		LRK54_RS10865	0.38	-2.0
2,402,839	-		LRK54_RS10865	0.38	-2.1
2,402,839	-		LRK54_RS10865	0.38	-0.4
2,402,886	+		LRK54_RS10865	0.39	-1.0
2,403,051	+		LRK54_RS10865	0.45	-0.7
2,403,051	+		LRK54_RS10865	0.45	-1.0
2,403,051	+		LRK54_RS10865	0.45	-0.9
2,403,051	+		LRK54_RS10865	0.45	-1.8
2,403,051	+		LRK54_RS10865	0.45	-1.1
2,403,051	+		LRK54_RS10865	0.45	-1.7
2,403,052	-		LRK54_RS10865	0.45	-1.9
2,403,052	-		LRK54_RS10865	0.45	-4.0
2,403,129	+		LRK54_RS10865	0.47	+1.4
2,403,129	+		LRK54_RS10865	0.47	-1.0
2,403,129	+		LRK54_RS10865	0.47	-0.3
2,403,130	-		LRK54_RS10865	0.47	+0.4
2,403,130	-		LRK54_RS10865	0.47	-1.8
2,403,130	-		LRK54_RS10865	0.47	+1.3
2,403,130	-		LRK54_RS10865	0.47	-0.1
2,403,130	-		LRK54_RS10865	0.47	-2.0
2,403,327	+		LRK54_RS10865	0.54	+0.0
2,403,328	-		LRK54_RS10865	0.54	-0.6
2,403,624	+		LRK54_RS10865	0.64	-2.1
2,403,624	+		LRK54_RS10865	0.64	-1.1
2,403,624	+		LRK54_RS10865	0.64	-0.7
2,403,624	+		LRK54_RS10865	0.64	+1.9
2,403,624	+		LRK54_RS10865	0.64	-1.0
2,403,624	+		LRK54_RS10865	0.64	-0.7
2,403,624	+		LRK54_RS10865	0.64	-1.9
2,403,625	-		LRK54_RS10865	0.64	-1.5
2,403,625	-		LRK54_RS10865	0.64	-1.3
2,403,625	-		LRK54_RS10865	0.64	-1.7
2,403,625	-		LRK54_RS10865	0.64	-2.1
2,403,625	-		LRK54_RS10865	0.64	-0.4
2,403,625	-		LRK54_RS10865	0.64	-1.3
2,403,625	-		LRK54_RS10865	0.64	-1.8
2,403,625	-		LRK54_RS10865	0.64	-1.9
2,403,625	-		LRK54_RS10865	0.64	-0.6
2,403,759	+		LRK54_RS10865	0.68	-1.8
2,403,759	+		LRK54_RS10865	0.68	-1.4
2,403,759	+		LRK54_RS10865	0.68	-2.1
2,403,759	+		LRK54_RS10865	0.68	-2.0
2,403,759	+		LRK54_RS10865	0.68	-0.8
2,403,759	+		LRK54_RS10865	0.68	-0.2
2,403,759	+		LRK54_RS10865	0.68	-2.6
2,403,760	-		LRK54_RS10865	0.68	-0.3
2,403,760	-		LRK54_RS10865	0.68	-0.9
2,403,760	-		LRK54_RS10865	0.68	-1.0
2,403,760	-		LRK54_RS10865	0.68	-1.0
2,403,760	-		LRK54_RS10865	0.68	-0.4
2,403,760	-		LRK54_RS10865	0.68	+0.0
2,403,760	-		LRK54_RS10865	0.68	-0.3
2,403,760	-		LRK54_RS10865	0.68	-0.6
2,403,760	-		LRK54_RS10865	0.68	-0.3
2,403,760	-		LRK54_RS10865	0.68	-0.3
2,403,760	-		LRK54_RS10865	0.68	-0.1
2,403,760	-		LRK54_RS10865	0.68	-0.7
2,403,870	+		LRK54_RS10865	0.72	-0.5
2,403,870	+		LRK54_RS10865	0.72	-0.6
2,403,870	+		LRK54_RS10865	0.72	-1.7
2,403,870	+		LRK54_RS10865	0.72	-2.8
2,403,870	+		LRK54_RS10865	0.72	+1.1
2,403,870	+		LRK54_RS10865	0.72	-1.4
2,403,871	-		LRK54_RS10865	0.72	-1.3
2,403,871	-		LRK54_RS10865	0.72	-0.8
2,403,871	-		LRK54_RS10865	0.72	-1.8
2,403,871	-		LRK54_RS10865	0.72	-0.8
2,403,871	-		LRK54_RS10865	0.72	+0.2
2,403,871	-		LRK54_RS10865	0.72	-0.8
2,403,871	-		LRK54_RS10865	0.72	-0.1
2,403,871	-		LRK54_RS10865	0.72	-1.0
2,404,038	+		LRK54_RS10865	0.78	-0.3
2,404,038	+		LRK54_RS10865	0.78	-0.0
2,404,038	+		LRK54_RS10865	0.78	+0.1
2,404,039	-		LRK54_RS10865	0.78	-1.8
2,404,039	-		LRK54_RS10865	0.78	+0.0
2,404,335	+		LRK54_RS10865	0.87	-0.8
2,404,335	+		LRK54_RS10865	0.87	+0.3
2,404,335	+		LRK54_RS10865	0.87	+0.3
2,404,336	-		LRK54_RS10865	0.87	-1.4
2,404,336	-		LRK54_RS10865	0.87	-0.7
2,404,336	-		LRK54_RS10865	0.87	-1.4
2,404,476	+				-1.0
2,404,476	+				-1.8
2,404,476	+				-0.7
2,404,476	+				-1.0
2,404,477	-				-0.9
2,404,477	-				-1.4
2,404,477	-				-0.7
2,404,477	-				-0.5
2,404,477	-				+0.1
2,404,829	-		LRK54_RS10870	0.34	-0.3
2,404,907	+		LRK54_RS10870	0.59	+0.6
2,404,907	+		LRK54_RS10870	0.59	+0.2
2,404,907	+		LRK54_RS10870	0.59	+1.1
2,404,907	+		LRK54_RS10870	0.59	+0.7
2,404,907	+		LRK54_RS10870	0.59	-2.3
2,404,907	+		LRK54_RS10870	0.59	-1.3
2,404,907	+		LRK54_RS10870	0.59	+3.1
2,404,907	+		LRK54_RS10870	0.59	-0.7
2,404,907	+		LRK54_RS10870	0.59	-0.8
2,404,907	+		LRK54_RS10870	0.59	-2.1
2,404,907	+		LRK54_RS10870	0.59	+0.3
2,404,907	+		LRK54_RS10870	0.59	-0.6
2,404,907	+		LRK54_RS10870	0.59	-1.1
2,404,907	+		LRK54_RS10870	0.59	-1.1
2,404,907	+		LRK54_RS10870	0.59	+1.0
2,404,908	-		LRK54_RS10870	0.59	+0.2
2,404,908	-		LRK54_RS10870	0.59	-0.4
2,404,908	-		LRK54_RS10870	0.59	-0.4
2,404,908	-		LRK54_RS10870	0.59	+0.1
2,404,908	-		LRK54_RS10870	0.59	-2.2
2,404,908	-		LRK54_RS10870	0.59	+1.0
2,404,908	-		LRK54_RS10870	0.59	-0.7
2,404,908	-		LRK54_RS10870	0.59	-0.2
2,404,908	-		LRK54_RS10870	0.59	-0.4
2,404,908	-		LRK54_RS10870	0.59	-0.7
2,405,066	+				+0.1
2,405,067	-				-1.2
2,405,091	+				-0.9
2,405,188	+				-0.5
2,405,189	-				-1.4
2,405,231	-		LRK54_RS10875	0.14	-0.9
2,405,509	+		LRK54_RS10875	0.55	-1.1
2,405,509	+		LRK54_RS10875	0.55	-2.1
2,405,509	+		LRK54_RS10875	0.55	+0.2
2,405,509	+		LRK54_RS10875	0.55	-0.5
2,405,509	+		LRK54_RS10875	0.55	+1.3
2,405,509	+		LRK54_RS10875	0.55	-0.5
2,405,509	+		LRK54_RS10875	0.55	+0.8
2,405,509	+		LRK54_RS10875	0.55	-1.8
2,405,509	+		LRK54_RS10875	0.55	+0.1
2,405,509	+		LRK54_RS10875	0.55	-1.1
2,405,509	+		LRK54_RS10875	0.55	-0.4
2,405,510	-		LRK54_RS10875	0.55	-1.8
2,405,510	-		LRK54_RS10875	0.55	-1.2
2,405,510	-		LRK54_RS10875	0.55	-0.8
2,405,510	-		LRK54_RS10875	0.55	-0.3
2,405,510	-		LRK54_RS10875	0.55	-0.7
2,405,510	-		LRK54_RS10875	0.55	+0.0
2,405,510	-		LRK54_RS10875	0.55	-0.2
2,405,510	-		LRK54_RS10875	0.55	-0.6
2,405,510	-		LRK54_RS10875	0.55	-1.2
2,405,510	-		LRK54_RS10875	0.55	-0.8