Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09520

Experiment: R2A with arsenate 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 15.625 mM
2,093,200	+		LRK54_RS09510	0.64	-0.6
2,093,200	+		LRK54_RS09510	0.64	+2.3
2,093,200	+		LRK54_RS09510	0.64	-0.7
2,093,201	-		LRK54_RS09510	0.64	-3.5
2,093,201	-		LRK54_RS09510	0.64	-0.2
2,093,201	-		LRK54_RS09510	0.64	-2.5
2,093,201	-		LRK54_RS09510	0.64	-2.6
2,093,201	-		LRK54_RS09510	0.64	-3.0
2,093,218	+		LRK54_RS09510	0.68	+0.7
2,093,218	+		LRK54_RS09510	0.68	-0.2
2,093,218	+		LRK54_RS09510	0.68	+0.2
2,093,218	+		LRK54_RS09510	0.68	+0.0
2,093,218	+		LRK54_RS09510	0.68	-1.4
2,093,218	+		LRK54_RS09510	0.68	-0.5
2,093,218	+		LRK54_RS09510	0.68	+0.6
2,093,218	+		LRK54_RS09510	0.68	+3.7
2,093,218	+		LRK54_RS09510	0.68	-0.5
2,093,218	+		LRK54_RS09510	0.68	-2.4
2,093,218	+		LRK54_RS09510	0.68	+0.8
2,093,219	-		LRK54_RS09510	0.68	-4.0
2,093,219	-		LRK54_RS09510	0.68	-3.7
2,093,219	-		LRK54_RS09510	0.68	-1.0
2,093,219	-		LRK54_RS09510	0.68	-2.2
2,093,219	-		LRK54_RS09510	0.68	-2.4
2,093,344	+				-0.4
2,093,344	+				-1.2
2,093,344	+				-0.4
2,093,344	+				+1.1
2,093,344	+				+0.9
2,093,345	-				-3.1
2,093,398	+				-0.7
2,093,398	+				-1.5
2,093,398	+				-1.2
2,093,399	-				-3.0
2,093,399	-				-2.2
2,093,497	+		LRK54_RS09515	0.16	-1.0
2,093,497	+		LRK54_RS09515	0.16	-1.5
2,093,497	+		LRK54_RS09515	0.16	-2.0
2,093,498	-		LRK54_RS09515	0.16	-2.6
2,093,498	-		LRK54_RS09515	0.16	-2.9
2,093,498	-		LRK54_RS09515	0.16	-1.2
2,093,498	-		LRK54_RS09515	0.16	-3.0
2,093,498	-		LRK54_RS09515	0.16	-0.8
2,093,498	-		LRK54_RS09515	0.16	-1.8
2,093,498	-		LRK54_RS09515	0.16	-2.4
2,093,498	-		LRK54_RS09515	0.16	-1.0
2,093,498	-		LRK54_RS09515	0.16	-3.0
2,093,498	-		LRK54_RS09515	0.16	-2.0
2,093,660	+		LRK54_RS09515	0.36	-0.7
2,093,660	+		LRK54_RS09515	0.36	-1.4
2,093,661	-		LRK54_RS09515	0.36	-2.4
2,093,829	+		LRK54_RS09515	0.58	-0.7
2,093,829	+		LRK54_RS09515	0.58	-0.9
2,093,829	+		LRK54_RS09515	0.58	-0.8
2,093,829	+		LRK54_RS09515	0.58	-0.5
2,093,829	+		LRK54_RS09515	0.58	-1.3
2,093,830	-		LRK54_RS09515	0.58	-2.7
2,093,830	-		LRK54_RS09515	0.58	-3.1
2,093,985	+		LRK54_RS09515	0.78	-0.6
2,093,985	+		LRK54_RS09515	0.78	-1.1
2,093,985	+		LRK54_RS09515	0.78	-1.6
2,093,985	+		LRK54_RS09515	0.78	-0.6
2,093,985	+		LRK54_RS09515	0.78	-2.9
2,093,985	+		LRK54_RS09515	0.78	+0.5
2,093,985	+		LRK54_RS09515	0.78	-0.8
2,093,985	+		LRK54_RS09515	0.78	-1.4
2,093,985	+		LRK54_RS09515	0.78	-2.0
2,093,986	-		LRK54_RS09515	0.78	-2.7
2,093,986	-		LRK54_RS09515	0.78	-2.2
2,093,986	-		LRK54_RS09515	0.78	-2.8
2,093,986	-		LRK54_RS09515	0.78	-3.0
2,094,033	+		LRK54_RS09515	0.84	+0.4
2,094,033	+		LRK54_RS09515	0.84	-1.8
2,094,033	+		LRK54_RS09515	0.84	-0.2
2,094,033	+		LRK54_RS09515	0.84	-0.8
2,094,033	+		LRK54_RS09515	0.84	-1.3
2,094,033	+		LRK54_RS09515	0.84	-1.2
2,094,033	+		LRK54_RS09515	0.84	-1.4
2,094,034	-		LRK54_RS09515	0.84	-2.4
2,094,034	-		LRK54_RS09515	0.84	-1.5
2,094,034	-		LRK54_RS09515	0.84	-1.4
2,094,034	-		LRK54_RS09515	0.84	-2.9
2,094,037	+		LRK54_RS09515	0.84	-0.5
2,094,037	+		LRK54_RS09515	0.84	-1.7
2,094,037	+		LRK54_RS09515	0.84	-1.0
2,094,037	+		LRK54_RS09515	0.84	-1.1
2,094,037	+		LRK54_RS09515	0.84	-0.7
2,094,037	+		LRK54_RS09515	0.84	-0.7
2,094,037	+		LRK54_RS09515	0.84	-1.5
2,094,037	+		LRK54_RS09515	0.84	+0.3
2,094,037	+		LRK54_RS09515	0.84	-0.6
2,094,037	+		LRK54_RS09515	0.84	-0.5
2,094,037	+		LRK54_RS09515	0.84	+0.8
2,094,037	+		LRK54_RS09515	0.84	-0.8
2,094,038	-		LRK54_RS09515	0.84	-3.2
2,094,038	-		LRK54_RS09515	0.84	-2.6
2,094,038	-		LRK54_RS09515	0.84	-4.3
2,094,038	-		LRK54_RS09515	0.84	-2.3
2,094,038	-		LRK54_RS09515	0.84	+1.3
2,094,038	-		LRK54_RS09515	0.84	-0.7
2,094,038	-		LRK54_RS09515	0.84	-3.2
2,094,038	-		LRK54_RS09515	0.84	-1.5
2,094,038	-		LRK54_RS09515	0.84	-1.1
2,094,038	-		LRK54_RS09515	0.84	+0.0
2,094,038	-		LRK54_RS09515	0.84	-3.5
2,094,038	-		LRK54_RS09515	0.84	-1.5
2,094,038	-		LRK54_RS09515	0.84	-1.9
2,094,038	-		LRK54_RS09515	0.84	-3.4
2,094,038	-		LRK54_RS09515	0.84	-2.7
2,094,038	-		LRK54_RS09515	0.84	-1.3
2,094,038	-		LRK54_RS09515	0.84	-2.7
2,094,038	-		LRK54_RS09515	0.84	-2.5
2,094,038	-		LRK54_RS09515	0.84	-3.6
2,094,239	+		LRK54_RS09520	0.12	-1.7
2,094,239	+		LRK54_RS09520	0.12	-0.4
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-1.6
2,094,239	+		LRK54_RS09520	0.12	-0.5
2,094,239	+		LRK54_RS09520	0.12	-0.5
2,094,239	+		LRK54_RS09520	0.12	+0.4
2,094,239	+		LRK54_RS09520	0.12	-0.1
2,094,239	+		LRK54_RS09520	0.12	+0.3
2,094,239	+		LRK54_RS09520	0.12	-0.4
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-1.1
2,094,240	-		LRK54_RS09520	0.12	+0.6
2,094,240	-		LRK54_RS09520	0.12	-1.1
2,094,240	-		LRK54_RS09520	0.12	-2.0
2,094,240	-		LRK54_RS09520	0.12	-3.4
2,094,240	-		LRK54_RS09520	0.12	+0.0
2,094,240	-		LRK54_RS09520	0.12	-2.6
2,094,240	-		LRK54_RS09520	0.12	-2.7
2,094,240	-		LRK54_RS09520	0.12	-1.0
2,094,240	-		LRK54_RS09520	0.12	-3.4
2,094,240	-		LRK54_RS09520	0.12	-2.2
2,094,240	-		LRK54_RS09520	0.12	-2.4
2,094,240	-		LRK54_RS09520	0.12	-2.5
2,094,240	-		LRK54_RS09520	0.12	-2.6
2,094,240	-		LRK54_RS09520	0.12	-2.2
2,094,274	+		LRK54_RS09520	0.16	-1.6
2,094,309	-		LRK54_RS09520	0.20	-2.5
2,094,406	+		LRK54_RS09520	0.31	-0.1
2,094,406	+		LRK54_RS09520	0.31	+1.0
2,094,406	+		LRK54_RS09520	0.31	-0.5
2,094,406	+		LRK54_RS09520	0.31	-0.1
2,094,406	+		LRK54_RS09520	0.31	-0.3
2,094,406	+		LRK54_RS09520	0.31	-0.9
2,094,407	-		LRK54_RS09520	0.31	-1.7
2,094,407	-		LRK54_RS09520	0.31	-2.4
2,094,407	-		LRK54_RS09520	0.31	-0.8
2,094,407	-		LRK54_RS09520	0.31	-2.3
2,094,407	-		LRK54_RS09520	0.31	-0.2
2,094,407	-		LRK54_RS09520	0.31	-0.7
2,094,407	-		LRK54_RS09520	0.31	-2.6
2,094,407	-		LRK54_RS09520	0.31	-2.1
2,094,407	-		LRK54_RS09520	0.31	+0.8
2,094,407	-		LRK54_RS09520	0.31	-1.5
2,094,434	+		LRK54_RS09520	0.34	-0.4
2,094,434	+		LRK54_RS09520	0.34	-0.3
2,094,434	+		LRK54_RS09520	0.34	-0.5
2,094,435	-		LRK54_RS09520	0.35	-1.6
2,094,435	-		LRK54_RS09520	0.35	-0.8
2,094,435	-		LRK54_RS09520	0.35	-1.8
2,094,435	-		LRK54_RS09520	0.35	-1.8
2,094,435	-		LRK54_RS09520	0.35	-0.6
2,094,435	-		LRK54_RS09520	0.35	-2.7
2,094,435	-		LRK54_RS09520	0.35	-1.9
2,094,436	-		LRK54_RS09520	0.35	-3.1
2,094,445	+		LRK54_RS09520	0.36	+0.2
2,094,445	+		LRK54_RS09520	0.36	-0.3
2,094,445	+		LRK54_RS09520	0.36	+0.6
2,094,445	+		LRK54_RS09520	0.36	-0.5
2,094,445	+		LRK54_RS09520	0.36	+1.0
2,094,445	+		LRK54_RS09520	0.36	-0.5
2,094,445	+		LRK54_RS09520	0.36	+1.0
2,094,445	+		LRK54_RS09520	0.36	+2.1
2,094,445	+		LRK54_RS09520	0.36	+0.1
2,094,445	+		LRK54_RS09520	0.36	-1.0
2,094,445	+		LRK54_RS09520	0.36	+0.8
2,094,445	+		LRK54_RS09520	0.36	-0.2
2,094,445	+		LRK54_RS09520	0.36	+1.1
2,094,445	+		LRK54_RS09520	0.36	+0.6
2,094,446	-		LRK54_RS09520	0.36	-1.5
2,094,446	-		LRK54_RS09520	0.36	-0.6
2,094,446	-		LRK54_RS09520	0.36	-0.2
2,094,446	-		LRK54_RS09520	0.36	-0.4
2,094,446	-		LRK54_RS09520	0.36	-1.8
2,094,446	-		LRK54_RS09520	0.36	-2.8
2,094,446	-		LRK54_RS09520	0.36	+0.2
2,094,446	-		LRK54_RS09520	0.36	-0.9
2,094,446	-		LRK54_RS09520	0.36	-0.7
2,094,446	-		LRK54_RS09520	0.36	-2.1
2,094,446	-		LRK54_RS09520	0.36	-3.1
2,094,446	-		LRK54_RS09520	0.36	-0.6
2,094,446	-		LRK54_RS09520	0.36	-1.6
2,094,446	-		LRK54_RS09520	0.36	-0.7
2,094,446	-		LRK54_RS09520	0.36	-0.5
2,094,446	-		LRK54_RS09520	0.36	-0.8
2,094,446	-		LRK54_RS09520	0.36	-0.8
2,094,446	-		LRK54_RS09520	0.36	-0.1
2,094,446	-		LRK54_RS09520	0.36	-4.2
2,094,446	-		LRK54_RS09520	0.36	-1.4
2,094,544	+		LRK54_RS09520	0.47	-1.2
2,094,544	+		LRK54_RS09520	0.47	-0.6
2,094,544	+		LRK54_RS09520	0.47	-1.0
2,094,545	-		LRK54_RS09520	0.47	-2.4
2,094,545	-		LRK54_RS09520	0.47	-3.3
2,094,545	-		LRK54_RS09520	0.47	-4.0
2,094,545	-		LRK54_RS09520	0.47	-2.5
2,094,545	-		LRK54_RS09520	0.47	+0.8
2,094,545	-		LRK54_RS09520	0.47	-1.6
2,094,545	-		LRK54_RS09520	0.47	-1.9
2,094,545	-		LRK54_RS09520	0.47	-1.4
2,094,545	-		LRK54_RS09520	0.47	-2.1
2,094,545	-		LRK54_RS09520	0.47	+0.3
2,094,545	-		LRK54_RS09520	0.47	-4.3
2,094,561	+		LRK54_RS09520	0.49	-0.2
2,094,591	+		LRK54_RS09520	0.53	-1.4
2,094,591	+		LRK54_RS09520	0.53	+0.2
2,094,591	+		LRK54_RS09520	0.53	-0.2
2,094,591	+		LRK54_RS09520	0.53	-0.5
2,094,592	-		LRK54_RS09520	0.53	-2.6
2,094,592	-		LRK54_RS09520	0.53	-4.3
2,094,592	-		LRK54_RS09520	0.53	-3.6
2,094,592	-		LRK54_RS09520	0.53	-2.8
2,094,692	+		LRK54_RS09520	0.64	+0.2
2,094,692	+		LRK54_RS09520	0.64	+1.1
2,094,692	+		LRK54_RS09520	0.64	-0.9
2,094,692	+		LRK54_RS09520	0.64	-1.8
2,094,692	+		LRK54_RS09520	0.64	+0.5
2,094,692	+		LRK54_RS09520	0.64	-1.4
2,094,692	+		LRK54_RS09520	0.64	-1.1
2,094,692	+		LRK54_RS09520	0.64	-1.1
2,094,692	+		LRK54_RS09520	0.64	-2.6
2,094,692	+		LRK54_RS09520	0.64	-1.0
2,094,692	+		LRK54_RS09520	0.64	-0.8
2,094,692	+		LRK54_RS09520	0.64	-0.5
2,094,692	+		LRK54_RS09520	0.64	-1.2
2,094,693	-		LRK54_RS09520	0.64	-2.7
2,094,693	-		LRK54_RS09520	0.64	-1.4
2,094,693	-		LRK54_RS09520	0.64	-2.3
2,094,693	-		LRK54_RS09520	0.64	-1.9
2,094,693	-		LRK54_RS09520	0.64	-2.4
2,094,693	-		LRK54_RS09520	0.64	-1.0
2,094,693	-		LRK54_RS09520	0.64	+0.3
2,094,693	-		LRK54_RS09520	0.64	+2.3
2,094,693	-		LRK54_RS09520	0.64	-0.8
2,094,693	-		LRK54_RS09520	0.64	-1.9
2,094,693	-		LRK54_RS09520	0.64	-3.5
2,094,693	-		LRK54_RS09520	0.64	-0.2
2,094,693	-		LRK54_RS09520	0.64	-2.6
2,094,693	-		LRK54_RS09520	0.64	-2.0
2,094,718	+		LRK54_RS09520	0.67	+0.9
2,094,718	+		LRK54_RS09520	0.67	-0.5
2,094,868	+		LRK54_RS09520	0.85	-0.5
2,094,868	+		LRK54_RS09520	0.85	-1.5
2,094,868	+		LRK54_RS09520	0.85	-1.2
2,094,868	+		LRK54_RS09520	0.85	-0.1
2,094,868	+		LRK54_RS09520	0.85	-0.8
2,094,868	+		LRK54_RS09520	0.85	+0.3
2,094,868	+		LRK54_RS09520	0.85	+0.3
2,094,868	+		LRK54_RS09520	0.85	-1.5
2,094,869	-		LRK54_RS09520	0.85	-3.0
2,094,869	-		LRK54_RS09520	0.85	-1.3
2,094,869	-		LRK54_RS09520	0.85	-0.1
2,094,869	-		LRK54_RS09520	0.85	-2.2
2,094,869	-		LRK54_RS09520	0.85	-1.1
2,094,869	-		LRK54_RS09520	0.85	-1.2
2,094,869	-		LRK54_RS09520	0.85	-2.0
2,094,869	-		LRK54_RS09520	0.85	-2.7
2,094,869	-		LRK54_RS09520	0.85	-1.7
2,094,869	-		LRK54_RS09520	0.85	-2.7
2,094,869	-		LRK54_RS09520	0.85	-2.3
2,094,869	-		LRK54_RS09520	0.85	-2.2
2,094,898	-		LRK54_RS09520	0.88	-1.5
2,095,170	+		LRK54_RS09525	0.54	-0.9
2,095,170	+		LRK54_RS09525	0.54	-2.0
2,095,170	+		LRK54_RS09525	0.54	-0.4
2,095,171	-		LRK54_RS09525	0.54	-2.9
2,095,171	-		LRK54_RS09525	0.54	-1.1
2,095,171	-		LRK54_RS09525	0.54	-0.6
2,095,171	-		LRK54_RS09525	0.54	+0.3
2,095,321	+				-1.7
2,095,321	+				-0.1
2,095,321	+				-1.9
2,095,321	+				-1.2
2,095,322	-				-2.9
2,095,351	+				+0.0
2,095,351	+				-1.2
2,095,351	+				-0.8
2,095,352	-				-3.0
2,095,352	-				-2.6
2,095,352	-				-1.7
2,095,636	+		LRK54_RS09530	0.11	-0.5
2,095,827	+		LRK54_RS09530	0.42	-1.5
2,095,827	+		LRK54_RS09530	0.42	+0.3
2,095,827	+		LRK54_RS09530	0.42	+0.0
2,095,827	+		LRK54_RS09530	0.42	-0.2
2,095,827	+		LRK54_RS09530	0.42	-0.2
2,095,827	+		LRK54_RS09530	0.42	-1.0
2,095,827	+		LRK54_RS09530	0.42	-1.6
2,095,827	+		LRK54_RS09530	0.42	-0.1
2,095,827	+		LRK54_RS09530	0.42	-1.0
2,095,827	+		LRK54_RS09530	0.42	-0.5
2,095,827	+		LRK54_RS09530	0.42	+0.5
2,095,827	+		LRK54_RS09530	0.42	+0.8
2,095,827	+		LRK54_RS09530	0.42	-0.1
2,095,827	+		LRK54_RS09530	0.42	-2.0
2,095,827	+		LRK54_RS09530	0.42	-0.8
2,095,827	+		LRK54_RS09530	0.42	-0.1
2,095,827	+		LRK54_RS09530	0.42	-0.8
2,095,827	+		LRK54_RS09530	0.42	-1.7
2,095,827	+		LRK54_RS09530	0.42	+0.1
2,095,828	-		LRK54_RS09530	0.42	+1.9
2,095,828	-		LRK54_RS09530	0.42	+0.0
2,095,828	-		LRK54_RS09530	0.42	-0.1
2,095,828	-		LRK54_RS09530	0.42	+0.0
2,095,828	-		LRK54_RS09530	0.42	-0.6
2,095,828	-		LRK54_RS09530	0.42	-0.7
2,095,828	-		LRK54_RS09530	0.42	+1.6
2,095,828	-		LRK54_RS09530	0.42	+0.5
2,095,828	-		LRK54_RS09530	0.42	-0.4
2,095,828	-		LRK54_RS09530	0.42	-0.2