Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09515

Experiment: R2A with arsenate 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 15.625 mM
2,092,432	+		LRK54_RS09505	0.40	+0.1
2,092,432	+		LRK54_RS09505	0.40	+0.2
2,092,432	+		LRK54_RS09505	0.40	-0.1
2,092,432	+		LRK54_RS09505	0.40	-0.5
2,092,433	-		LRK54_RS09505	0.40	-1.9
2,092,512	+		LRK54_RS09505	0.55	+0.0
2,092,512	+		LRK54_RS09505	0.55	-0.3
2,092,512	+		LRK54_RS09505	0.55	-0.6
2,092,513	-		LRK54_RS09505	0.55	-3.0
2,092,513	-		LRK54_RS09505	0.55	-3.6
2,092,513	-		LRK54_RS09505	0.55	-5.1
2,092,513	-		LRK54_RS09505	0.55	-0.9
2,092,513	-		LRK54_RS09505	0.55	-4.2
2,092,513	-		LRK54_RS09505	0.55	-0.2
2,092,513	-		LRK54_RS09505	0.55	-3.3
2,092,513	-		LRK54_RS09505	0.55	-1.8
2,092,573	+		LRK54_RS09505	0.67	+0.0
2,092,573	+		LRK54_RS09505	0.67	-0.5
2,092,574	-		LRK54_RS09505	0.67	-1.3
2,092,574	-		LRK54_RS09505	0.67	-2.0
2,092,574	-		LRK54_RS09505	0.67	-1.8
2,092,588	+		LRK54_RS09505	0.70	-1.1
2,092,722	+				-1.9
2,092,722	+				+0.4
2,092,722	+				-0.9
2,092,722	+				-0.8
2,092,722	+				-0.5
2,092,722	+				+0.2
2,092,723	-				-3.1
2,092,723	-				-3.3
2,092,723	-				-2.4
2,092,744	+				-0.5
2,092,744	+				+0.0
2,092,745	-				-1.6
2,092,745	-				-2.4
2,092,745	-				-2.3
2,092,745	-				-1.0
2,092,745	-				-4.2
2,092,745	-				-0.5
2,092,787	+				-0.7
2,092,787	+				-0.8
2,092,787	+				+0.3
2,092,787	+				-1.0
2,092,787	+				-1.1
2,092,788	-				-3.6
2,092,788	-				-2.4
2,092,801	+				-0.0
2,092,801	+				+0.1
2,092,801	+				+0.3
2,092,801	+				-3.5
2,092,801	+				-0.3
2,092,801	+				-0.2
2,092,801	+				-0.2
2,092,802	-				+1.4
2,092,802	-				-4.6
2,092,802	-				-2.2
2,092,802	-				-1.9
2,092,802	-				-1.9
2,092,802	-				-2.6
2,092,802	-				-2.2
2,092,802	-				-1.1
2,092,802	-				-3.5
2,092,802	-				-3.1
2,092,802	-				-3.5
2,092,803	+				-0.6
2,092,803	+				+0.1
2,092,804	-				-1.7
2,092,804	-				-2.3
2,092,804	-				-0.3
2,092,882	+				-0.7
2,092,882	+				-0.8
2,092,883	-				-3.1
2,092,883	-				-1.0
2,092,883	-				-0.8
2,092,883	-				-3.4
2,092,986	+		LRK54_RS09510	0.21	-0.8
2,092,986	+		LRK54_RS09510	0.21	+0.5
2,092,986	+		LRK54_RS09510	0.21	-0.5
2,092,986	+		LRK54_RS09510	0.21	-0.7
2,092,986	+		LRK54_RS09510	0.21	+0.2
2,092,986	+		LRK54_RS09510	0.21	-1.6
2,092,986	+		LRK54_RS09510	0.21	-0.6
2,092,986	+		LRK54_RS09510	0.21	-0.4
2,092,986	+		LRK54_RS09510	0.21	-0.3
2,092,986	+		LRK54_RS09510	0.21	-2.4
2,092,986	+		LRK54_RS09510	0.21	-0.2
2,092,986	-		LRK54_RS09510	0.21	-2.0
2,092,987	-		LRK54_RS09510	0.21	-4.2
2,092,987	-		LRK54_RS09510	0.21	+0.0
2,092,987	-		LRK54_RS09510	0.21	-2.6
2,092,987	-		LRK54_RS09510	0.21	-0.7
2,092,987	-		LRK54_RS09510	0.21	-2.7
2,092,987	-		LRK54_RS09510	0.21	-2.2
2,092,987	-		LRK54_RS09510	0.21	-1.2
2,093,053	+		LRK54_RS09510	0.35	+2.3
2,093,053	+		LRK54_RS09510	0.35	-0.8
2,093,053	+		LRK54_RS09510	0.35	+0.0
2,093,053	+		LRK54_RS09510	0.35	-0.4
2,093,077	+		LRK54_RS09510	0.39	-0.4
2,093,077	+		LRK54_RS09510	0.39	-0.5
2,093,077	+		LRK54_RS09510	0.39	+0.0
2,093,077	+		LRK54_RS09510	0.39	-0.9
2,093,077	+		LRK54_RS09510	0.39	-0.2
2,093,077	+		LRK54_RS09510	0.39	-0.5
2,093,077	+		LRK54_RS09510	0.39	-2.6
2,093,077	+		LRK54_RS09510	0.39	+0.8
2,093,077	+		LRK54_RS09510	0.39	-0.4
2,093,077	+		LRK54_RS09510	0.39	-0.2
2,093,077	+		LRK54_RS09510	0.39	-0.5
2,093,077	+		LRK54_RS09510	0.39	-0.9
2,093,078	-		LRK54_RS09510	0.40	-2.5
2,093,078	-		LRK54_RS09510	0.40	-2.3
2,093,078	-		LRK54_RS09510	0.40	-1.6
2,093,078	-		LRK54_RS09510	0.40	-2.3
2,093,078	-		LRK54_RS09510	0.40	+0.3
2,093,078	-		LRK54_RS09510	0.40	-1.7
2,093,078	-		LRK54_RS09510	0.40	-1.1
2,093,078	-		LRK54_RS09510	0.40	-4.0
2,093,078	-		LRK54_RS09510	0.40	-1.9
2,093,078	-		LRK54_RS09510	0.40	-2.5
2,093,078	-		LRK54_RS09510	0.40	-1.6
2,093,078	-		LRK54_RS09510	0.40	-1.8
2,093,200	+		LRK54_RS09510	0.64	-0.6
2,093,200	+		LRK54_RS09510	0.64	+2.3
2,093,200	+		LRK54_RS09510	0.64	-0.7
2,093,201	-		LRK54_RS09510	0.64	-3.5
2,093,201	-		LRK54_RS09510	0.64	-0.2
2,093,201	-		LRK54_RS09510	0.64	-2.5
2,093,201	-		LRK54_RS09510	0.64	-2.6
2,093,201	-		LRK54_RS09510	0.64	-3.0
2,093,218	+		LRK54_RS09510	0.68	+0.7
2,093,218	+		LRK54_RS09510	0.68	-0.2
2,093,218	+		LRK54_RS09510	0.68	+0.2
2,093,218	+		LRK54_RS09510	0.68	+0.0
2,093,218	+		LRK54_RS09510	0.68	-1.4
2,093,218	+		LRK54_RS09510	0.68	-0.5
2,093,218	+		LRK54_RS09510	0.68	+0.6
2,093,218	+		LRK54_RS09510	0.68	+3.7
2,093,218	+		LRK54_RS09510	0.68	-0.5
2,093,218	+		LRK54_RS09510	0.68	-2.4
2,093,218	+		LRK54_RS09510	0.68	+0.8
2,093,219	-		LRK54_RS09510	0.68	-4.0
2,093,219	-		LRK54_RS09510	0.68	-3.7
2,093,219	-		LRK54_RS09510	0.68	-1.0
2,093,219	-		LRK54_RS09510	0.68	-2.2
2,093,219	-		LRK54_RS09510	0.68	-2.4
2,093,344	+				-0.4
2,093,344	+				-1.2
2,093,344	+				-0.4
2,093,344	+				+1.1
2,093,344	+				+0.9
2,093,345	-				-3.1
2,093,398	+				-0.7
2,093,398	+				-1.5
2,093,398	+				-1.2
2,093,399	-				-3.0
2,093,399	-				-2.2
2,093,497	+		LRK54_RS09515	0.16	-1.0
2,093,497	+		LRK54_RS09515	0.16	-1.5
2,093,497	+		LRK54_RS09515	0.16	-2.0
2,093,498	-		LRK54_RS09515	0.16	-2.6
2,093,498	-		LRK54_RS09515	0.16	-2.9
2,093,498	-		LRK54_RS09515	0.16	-1.2
2,093,498	-		LRK54_RS09515	0.16	-3.0
2,093,498	-		LRK54_RS09515	0.16	-0.8
2,093,498	-		LRK54_RS09515	0.16	-1.8
2,093,498	-		LRK54_RS09515	0.16	-2.4
2,093,498	-		LRK54_RS09515	0.16	-1.0
2,093,498	-		LRK54_RS09515	0.16	-3.0
2,093,498	-		LRK54_RS09515	0.16	-2.0
2,093,660	+		LRK54_RS09515	0.36	-0.7
2,093,660	+		LRK54_RS09515	0.36	-1.4
2,093,661	-		LRK54_RS09515	0.36	-2.4
2,093,829	+		LRK54_RS09515	0.58	-0.7
2,093,829	+		LRK54_RS09515	0.58	-0.9
2,093,829	+		LRK54_RS09515	0.58	-0.8
2,093,829	+		LRK54_RS09515	0.58	-0.5
2,093,829	+		LRK54_RS09515	0.58	-1.3
2,093,830	-		LRK54_RS09515	0.58	-2.7
2,093,830	-		LRK54_RS09515	0.58	-3.1
2,093,985	+		LRK54_RS09515	0.78	-0.6
2,093,985	+		LRK54_RS09515	0.78	-1.1
2,093,985	+		LRK54_RS09515	0.78	-1.6
2,093,985	+		LRK54_RS09515	0.78	-0.6
2,093,985	+		LRK54_RS09515	0.78	-2.9
2,093,985	+		LRK54_RS09515	0.78	+0.5
2,093,985	+		LRK54_RS09515	0.78	-0.8
2,093,985	+		LRK54_RS09515	0.78	-1.4
2,093,985	+		LRK54_RS09515	0.78	-2.0
2,093,986	-		LRK54_RS09515	0.78	-2.7
2,093,986	-		LRK54_RS09515	0.78	-2.2
2,093,986	-		LRK54_RS09515	0.78	-2.8
2,093,986	-		LRK54_RS09515	0.78	-3.0
2,094,033	+		LRK54_RS09515	0.84	+0.4
2,094,033	+		LRK54_RS09515	0.84	-1.8
2,094,033	+		LRK54_RS09515	0.84	-0.2
2,094,033	+		LRK54_RS09515	0.84	-0.8
2,094,033	+		LRK54_RS09515	0.84	-1.3
2,094,033	+		LRK54_RS09515	0.84	-1.2
2,094,033	+		LRK54_RS09515	0.84	-1.4
2,094,034	-		LRK54_RS09515	0.84	-2.4
2,094,034	-		LRK54_RS09515	0.84	-1.5
2,094,034	-		LRK54_RS09515	0.84	-1.4
2,094,034	-		LRK54_RS09515	0.84	-2.9
2,094,037	+		LRK54_RS09515	0.84	-0.5
2,094,037	+		LRK54_RS09515	0.84	-1.7
2,094,037	+		LRK54_RS09515	0.84	-1.0
2,094,037	+		LRK54_RS09515	0.84	-1.1
2,094,037	+		LRK54_RS09515	0.84	-0.7
2,094,037	+		LRK54_RS09515	0.84	-0.7
2,094,037	+		LRK54_RS09515	0.84	-1.5
2,094,037	+		LRK54_RS09515	0.84	+0.3
2,094,037	+		LRK54_RS09515	0.84	-0.6
2,094,037	+		LRK54_RS09515	0.84	-0.5
2,094,037	+		LRK54_RS09515	0.84	+0.8
2,094,037	+		LRK54_RS09515	0.84	-0.8
2,094,038	-		LRK54_RS09515	0.84	-3.2
2,094,038	-		LRK54_RS09515	0.84	-2.6
2,094,038	-		LRK54_RS09515	0.84	-4.3
2,094,038	-		LRK54_RS09515	0.84	-2.3
2,094,038	-		LRK54_RS09515	0.84	+1.3
2,094,038	-		LRK54_RS09515	0.84	-0.7
2,094,038	-		LRK54_RS09515	0.84	-3.2
2,094,038	-		LRK54_RS09515	0.84	-1.5
2,094,038	-		LRK54_RS09515	0.84	-1.1
2,094,038	-		LRK54_RS09515	0.84	+0.0
2,094,038	-		LRK54_RS09515	0.84	-3.5
2,094,038	-		LRK54_RS09515	0.84	-1.5
2,094,038	-		LRK54_RS09515	0.84	-1.9
2,094,038	-		LRK54_RS09515	0.84	-3.4
2,094,038	-		LRK54_RS09515	0.84	-2.7
2,094,038	-		LRK54_RS09515	0.84	-1.3
2,094,038	-		LRK54_RS09515	0.84	-2.7
2,094,038	-		LRK54_RS09515	0.84	-2.5
2,094,038	-		LRK54_RS09515	0.84	-3.6
2,094,239	+		LRK54_RS09520	0.12	-1.7
2,094,239	+		LRK54_RS09520	0.12	-0.4
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-1.6
2,094,239	+		LRK54_RS09520	0.12	-0.5
2,094,239	+		LRK54_RS09520	0.12	-0.5
2,094,239	+		LRK54_RS09520	0.12	+0.4
2,094,239	+		LRK54_RS09520	0.12	-0.1
2,094,239	+		LRK54_RS09520	0.12	+0.3
2,094,239	+		LRK54_RS09520	0.12	-0.4
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-0.8
2,094,239	+		LRK54_RS09520	0.12	-1.1
2,094,240	-		LRK54_RS09520	0.12	+0.6
2,094,240	-		LRK54_RS09520	0.12	-1.1
2,094,240	-		LRK54_RS09520	0.12	-2.0
2,094,240	-		LRK54_RS09520	0.12	-3.4
2,094,240	-		LRK54_RS09520	0.12	+0.0
2,094,240	-		LRK54_RS09520	0.12	-2.6
2,094,240	-		LRK54_RS09520	0.12	-2.7
2,094,240	-		LRK54_RS09520	0.12	-1.0
2,094,240	-		LRK54_RS09520	0.12	-3.4
2,094,240	-		LRK54_RS09520	0.12	-2.2
2,094,240	-		LRK54_RS09520	0.12	-2.4
2,094,240	-		LRK54_RS09520	0.12	-2.5
2,094,240	-		LRK54_RS09520	0.12	-2.6
2,094,240	-		LRK54_RS09520	0.12	-2.2
2,094,274	+		LRK54_RS09520	0.16	-1.6
2,094,309	-		LRK54_RS09520	0.20	-2.5
2,094,406	+		LRK54_RS09520	0.31	-0.1
2,094,406	+		LRK54_RS09520	0.31	+1.0
2,094,406	+		LRK54_RS09520	0.31	-0.5
2,094,406	+		LRK54_RS09520	0.31	-0.1
2,094,406	+		LRK54_RS09520	0.31	-0.3
2,094,406	+		LRK54_RS09520	0.31	-0.9
2,094,407	-		LRK54_RS09520	0.31	-1.7
2,094,407	-		LRK54_RS09520	0.31	-2.4
2,094,407	-		LRK54_RS09520	0.31	-0.8
2,094,407	-		LRK54_RS09520	0.31	-2.3
2,094,407	-		LRK54_RS09520	0.31	-0.2
2,094,407	-		LRK54_RS09520	0.31	-0.7
2,094,407	-		LRK54_RS09520	0.31	-2.6
2,094,407	-		LRK54_RS09520	0.31	-2.1
2,094,407	-		LRK54_RS09520	0.31	+0.8
2,094,407	-		LRK54_RS09520	0.31	-1.5
2,094,434	+		LRK54_RS09520	0.34	-0.4
2,094,434	+		LRK54_RS09520	0.34	-0.3
2,094,434	+		LRK54_RS09520	0.34	-0.5
2,094,435	-		LRK54_RS09520	0.35	-1.6
2,094,435	-		LRK54_RS09520	0.35	-0.8
2,094,435	-		LRK54_RS09520	0.35	-1.8
2,094,435	-		LRK54_RS09520	0.35	-1.8
2,094,435	-		LRK54_RS09520	0.35	-0.6
2,094,435	-		LRK54_RS09520	0.35	-2.7
2,094,435	-		LRK54_RS09520	0.35	-1.9
2,094,436	-		LRK54_RS09520	0.35	-3.1
2,094,445	+		LRK54_RS09520	0.36	+0.2
2,094,445	+		LRK54_RS09520	0.36	-0.3
2,094,445	+		LRK54_RS09520	0.36	+0.6
2,094,445	+		LRK54_RS09520	0.36	-0.5
2,094,445	+		LRK54_RS09520	0.36	+1.0
2,094,445	+		LRK54_RS09520	0.36	-0.5
2,094,445	+		LRK54_RS09520	0.36	+1.0
2,094,445	+		LRK54_RS09520	0.36	+2.1
2,094,445	+		LRK54_RS09520	0.36	+0.1
2,094,445	+		LRK54_RS09520	0.36	-1.0
2,094,445	+		LRK54_RS09520	0.36	+0.8
2,094,445	+		LRK54_RS09520	0.36	-0.2
2,094,445	+		LRK54_RS09520	0.36	+1.1
2,094,445	+		LRK54_RS09520	0.36	+0.6
2,094,446	-		LRK54_RS09520	0.36	-1.5
2,094,446	-		LRK54_RS09520	0.36	-0.6
2,094,446	-		LRK54_RS09520	0.36	-0.2
2,094,446	-		LRK54_RS09520	0.36	-0.4
2,094,446	-		LRK54_RS09520	0.36	-1.8
2,094,446	-		LRK54_RS09520	0.36	-2.8
2,094,446	-		LRK54_RS09520	0.36	+0.2
2,094,446	-		LRK54_RS09520	0.36	-0.9
2,094,446	-		LRK54_RS09520	0.36	-0.7
2,094,446	-		LRK54_RS09520	0.36	-2.1
2,094,446	-		LRK54_RS09520	0.36	-3.1
2,094,446	-		LRK54_RS09520	0.36	-0.6
2,094,446	-		LRK54_RS09520	0.36	-1.6
2,094,446	-		LRK54_RS09520	0.36	-0.7
2,094,446	-		LRK54_RS09520	0.36	-0.5
2,094,446	-		LRK54_RS09520	0.36	-0.8
2,094,446	-		LRK54_RS09520	0.36	-0.8
2,094,446	-		LRK54_RS09520	0.36	-0.1
2,094,446	-		LRK54_RS09520	0.36	-4.2
2,094,446	-		LRK54_RS09520	0.36	-1.4
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2,094,545	-		LRK54_RS09520	0.47	-3.3
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2,094,545	-		LRK54_RS09520	0.47	+0.8
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2,094,545	-		LRK54_RS09520	0.47	-1.9
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2,094,692	+		LRK54_RS09520	0.64	+0.2
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2,094,692	+		LRK54_RS09520	0.64	-1.8
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2,094,869	-		LRK54_RS09520	0.85	-2.7
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2,094,898	-		LRK54_RS09520	0.88	-1.5