Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4738 and Ac3H11_4739 are separated by 164 nucleotides Ac3H11_4739 and Ac3H11_4740 are separated by 106 nucleotides Ac3H11_4740 and Ac3H11_4741 are separated by 62 nucleotides Ac3H11_4741 and Ac3H11_4742 are separated by 68 nucleotides
Ac3H11_4738 - Ferredoxin reductase, at 43,666 to 44,715
_4738
Ac3H11_4739 - FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 44,880 to 45,236
_4739
Ac3H11_4740 - Twin-arginine translocation protein TatA, at 45,343 to 45,585
_4740
Ac3H11_4741 - Twin-arginine translocation protein TatB, at 45,648 to 46,109
_4741
Ac3H11_4742 - Twin-arginine translocation protein TatC, at 46,178 to 46,972
_4742
Position (kb) 44
45
46 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 44.030 kb on - strand, within Ac3H11_4738 at 44.049 kb on + strand, within Ac3H11_4738 at 44.129 kb on + strand, within Ac3H11_4738 at 44.278 kb on + strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.326 kb on + strand, within Ac3H11_4738 at 44.326 kb on + strand, within Ac3H11_4738 at 44.327 kb on - strand, within Ac3H11_4738 at 44.327 kb on - strand, within Ac3H11_4738 at 44.518 kb on + strand, within Ac3H11_4738 at 44.851 kb on - strand at 44.851 kb on - strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.858 kb on - strand at 44.858 kb on - strand at 44.858 kb on - strand at 44.858 kb on - strand at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.024 kb on - strand, within Ac3H11_4739 at 45.151 kb on + strand, within Ac3H11_4739 at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 44,030 - Ac3H11_4738 0.35 -0.6 44,049 + Ac3H11_4738 0.36 +1.5 44,129 + Ac3H11_4738 0.44 -0.6 44,278 + Ac3H11_4738 0.58 -0.7 44,294 - Ac3H11_4738 0.60 +3.8 44,294 - Ac3H11_4738 0.60 -0.1 44,294 - Ac3H11_4738 0.60 +1.0 44,326 + Ac3H11_4738 0.63 -0.7 44,326 + Ac3H11_4738 0.63 -0.0 44,327 - Ac3H11_4738 0.63 -0.1 44,327 - Ac3H11_4738 0.63 +0.5 44,518 + Ac3H11_4738 0.81 +0.4 44,851 - +0.7 44,851 - -0.4 44,857 + -1.0 44,857 + -1.1 44,857 + +0.4 44,857 + -1.0 44,857 + -1.7 44,857 + -0.4 44,858 - -1.0 44,858 - +0.8 44,858 - -0.8 44,858 - -0.7 44,943 + Ac3H11_4739 0.18 -0.7 44,943 + Ac3H11_4739 0.18 +0.1 44,943 + Ac3H11_4739 0.18 -0.5 44,943 + Ac3H11_4739 0.18 -0.7 44,943 + Ac3H11_4739 0.18 +0.0 44,943 + Ac3H11_4739 0.18 +1.2 44,943 + Ac3H11_4739 0.18 -1.3 44,943 + Ac3H11_4739 0.18 -1.0 44,943 + Ac3H11_4739 0.18 -1.5 44,944 - Ac3H11_4739 0.18 +0.0 44,944 - Ac3H11_4739 0.18 -1.0 44,944 - Ac3H11_4739 0.18 -0.8 44,944 - Ac3H11_4739 0.18 -0.8 44,944 - Ac3H11_4739 0.18 +0.1 44,944 - Ac3H11_4739 0.18 -1.4 44,944 - Ac3H11_4739 0.18 -1.0 44,944 - Ac3H11_4739 0.18 -2.9 44,944 - Ac3H11_4739 0.18 +0.8 45,023 + Ac3H11_4739 0.40 -0.4 45,023 + Ac3H11_4739 0.40 -1.0 45,023 + Ac3H11_4739 0.40 -1.0 45,023 + Ac3H11_4739 0.40 -0.8 45,023 + Ac3H11_4739 0.40 +0.5 45,024 - Ac3H11_4739 0.40 -1.3 45,151 + Ac3H11_4739 0.76 -4.0 45,260 + +0.4 45,260 + -1.0 45,260 + -0.3 45,260 + -0.4 45,260 + +0.9 45,260 + -1.0
Or see this region's nucleotide sequence