Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2715 and Ac3H11_2716 are separated by 365 nucleotides Ac3H11_2716 and Ac3H11_2717 are separated by 219 nucleotides
Ac3H11_2715 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 1,015,136 to 1,016,935
_2715
Ac3H11_2716 - BarH, at 1,017,301 to 1,018,608
_2716
Ac3H11_2717 - Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13), at 1,018,828 to 1,019,817
_2717
Position (kb)
1017
1018
1019 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1016.494 kb on - strand, within Ac3H11_2715 at 1016.642 kb on + strand, within Ac3H11_2715 at 1016.643 kb on - strand, within Ac3H11_2715 at 1016.678 kb on + strand, within Ac3H11_2715 at 1016.678 kb on + strand, within Ac3H11_2715 at 1016.679 kb on - strand, within Ac3H11_2715 at 1016.679 kb on - strand, within Ac3H11_2715 at 1016.933 kb on + strand at 1017.000 kb on - strand at 1017.056 kb on - strand at 1017.153 kb on + strand at 1017.159 kb on + strand at 1017.160 kb on - strand at 1017.178 kb on + strand at 1017.178 kb on + strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.179 kb on - strand at 1017.215 kb on + strand at 1017.229 kb on + strand at 1017.242 kb on + strand at 1017.242 kb on + strand at 1017.375 kb on + strand at 1017.388 kb on + strand at 1017.464 kb on - strand, within Ac3H11_2716 at 1017.464 kb on - strand, within Ac3H11_2716 at 1017.505 kb on + strand, within Ac3H11_2716 at 1017.505 kb on + strand, within Ac3H11_2716 at 1017.505 kb on + strand, within Ac3H11_2716 at 1017.652 kb on + strand, within Ac3H11_2716 at 1017.652 kb on + strand, within Ac3H11_2716 at 1017.691 kb on + strand, within Ac3H11_2716 at 1017.692 kb on - strand, within Ac3H11_2716 at 1017.880 kb on + strand, within Ac3H11_2716 at 1018.077 kb on + strand, within Ac3H11_2716 at 1018.078 kb on - strand, within Ac3H11_2716 at 1018.115 kb on - strand, within Ac3H11_2716 at 1018.606 kb on + strand at 1018.670 kb on - strand at 1018.847 kb on - strand at 1018.847 kb on - strand at 1018.880 kb on - strand at 1018.996 kb on + strand, within Ac3H11_2717 at 1018.997 kb on - strand, within Ac3H11_2717 at 1018.997 kb on - strand, within Ac3H11_2717 at 1018.997 kb on - strand, within Ac3H11_2717 at 1019.026 kb on + strand, within Ac3H11_2717 at 1019.027 kb on - strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.206 kb on - strand, within Ac3H11_2717 at 1019.327 kb on - strand, within Ac3H11_2717
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 1,016,494 - Ac3H11_2715 0.75 -2.4 1,016,642 + Ac3H11_2715 0.84 -1.9 1,016,643 - Ac3H11_2715 0.84 -0.5 1,016,678 + Ac3H11_2715 0.86 +0.9 1,016,678 + Ac3H11_2715 0.86 -1.1 1,016,679 - Ac3H11_2715 0.86 +0.8 1,016,679 - Ac3H11_2715 0.86 -1.2 1,016,933 + -2.5 1,017,000 - +2.0 1,017,056 - +1.1 1,017,153 + -1.8 1,017,159 + -0.5 1,017,160 - -0.0 1,017,178 + -1.8 1,017,178 + -0.1 1,017,179 - -0.1 1,017,179 - +0.2 1,017,179 - +0.1 1,017,179 - -0.7 1,017,179 - -0.9 1,017,179 - +0.4 1,017,179 - +0.2 1,017,179 - -0.1 1,017,179 - +0.0 1,017,215 + -1.2 1,017,229 + +0.7 1,017,242 + -2.6 1,017,242 + +1.9 1,017,375 + +1.2 1,017,388 + -0.6 1,017,464 - Ac3H11_2716 0.12 +0.8 1,017,464 - Ac3H11_2716 0.12 -0.8 1,017,505 + Ac3H11_2716 0.16 -1.0 1,017,505 + Ac3H11_2716 0.16 -1.5 1,017,505 + Ac3H11_2716 0.16 -0.9 1,017,652 + Ac3H11_2716 0.27 -2.7 1,017,652 + Ac3H11_2716 0.27 -1.6 1,017,691 + Ac3H11_2716 0.30 -1.4 1,017,692 - Ac3H11_2716 0.30 +0.8 1,017,880 + Ac3H11_2716 0.44 +0.6 1,018,077 + Ac3H11_2716 0.59 -0.2 1,018,078 - Ac3H11_2716 0.59 -2.5 1,018,115 - Ac3H11_2716 0.62 -0.6 1,018,606 + +0.3 1,018,670 - -0.0 1,018,847 - +0.3 1,018,847 - +0.8 1,018,880 - -0.8 1,018,996 + Ac3H11_2717 0.17 -0.2 1,018,997 - Ac3H11_2717 0.17 +0.7 1,018,997 - Ac3H11_2717 0.17 +1.6 1,018,997 - Ac3H11_2717 0.17 -1.7 1,019,026 + Ac3H11_2717 0.20 -0.9 1,019,027 - Ac3H11_2717 0.20 +0.2 1,019,173 + Ac3H11_2717 0.35 +0.1 1,019,173 + Ac3H11_2717 0.35 -1.2 1,019,173 + Ac3H11_2717 0.35 +0.9 1,019,173 + Ac3H11_2717 0.35 +1.4 1,019,173 + Ac3H11_2717 0.35 +0.1 1,019,173 + Ac3H11_2717 0.35 -0.3 1,019,174 - Ac3H11_2717 0.35 -0.4 1,019,174 - Ac3H11_2717 0.35 +1.6 1,019,174 - Ac3H11_2717 0.35 +1.0 1,019,174 - Ac3H11_2717 0.35 +0.4 1,019,174 - Ac3H11_2717 0.35 -0.6 1,019,206 - Ac3H11_2717 0.38 -0.1 1,019,327 - Ac3H11_2717 0.50 +3.0
Or see this region's nucleotide sequence